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Platform GPL4359 Query DataSets for GPL4359
Status Public on Sep 20, 2006
Title [Poplar] Affymetrix Poplar Genome Array
Technology type in situ oligonucleotide
Distribution commercial
Organism Populus sp.
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

In total, the Poplar Genome Array contains more than 61,000 probe sets representing over 56,000 transcripts and gene predictions.

This array was designed based on content from UniGene Build #6 (March 16, 2005) and from GenBank® mRNAs and ESTs for all Populus species up to April 26, 2005. Additional array design content was derived from the predicted gene set v1.1 from the Populus genome project (P. trichocarpa), led by the U.S. Department of Energy and based at the Joint Genome Institute (JGI), Walnut Creek, CA (download date May 4, 2005).
 
Web link http://www.affymetrix.com/support/technical/byproduct.affx?product=poplar
http://www.affymetrix.com/analysis/index.affx
Submission date Sep 20, 2006
Last update date Jan 02, 2015
Organization Affymetrix, Inc.
E-mail geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (1096) GSM136936, GSM136938, GSM244430, GSM244431, GSM244432, GSM244433 
Series (83)
GSE5887 Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
GSE9673 Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
GSE12152 Genome scale transcriptome analysis of shoot organogenesis in poplar

Data table header descriptions
ID Affymetrix Probe Set ID
GB_ACC GenBank Accession Number
Species Scientific Name The genus and species of the organism represented by the probe set.
Annotation Date The date that the annotations for this probe array were last updated. It will generally be earlier than the date when the annotations were posted on the Affymetrix web site.
Sequence Type Indicates whether the sequence is an Exemplar, Consensus or Control sequence. An Exemplar is a single nucleotide sequence taken directly from a public database. This sequence could be an mRNA or EST. A Consensus sequence, is a nucleotide sequence assembled by Affymetrix, based on one or more sequence taken from a public database.
Representative Public ID The accession number of a representative sequence. Note that for consensus-based probe sets, the representative sequence is only one of several sequences (sequence sub-clusters) used to build the consensus sequence and it is not directly used to derive the probe sequences. The representative sequence is chosen during array design as a sequence that is best associated with the transcribed region being interrogated by the probe set. Refer to the "Sequence Source" field to determine the database used.
Gene Ontology Biological Process Gene Ontology Consortium Biological Process derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
Gene Ontology Cellular Component Gene Ontology Consortium Cellular Component derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
Gene Ontology Molecular Function Gene Ontology Consortium Molecular Function derived from LocusLink. Each annotation consists of three parts: "Accession Number // Description // Evidence". The description corresponds directly to the GO ID. The evidence can be "direct", or "extended".
SPOT_ID Sequence Type: Indicates whether the sequence is an Exemplar, Consensus or Control sequence. An Exemplar is a single nucleotide sequence taken directly from a public database. This sequence could be an mRNA or EST. A Consensus sequence, is a nucleotide sequence assembled by Affymetrix, based on one or more sequence taken from a public database.

Data table
ID GB_ACC Species Scientific Name Annotation Date Sequence Type Representative Public ID Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function SPOT_ID
AFFX-BioB-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioB-3 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioB-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioB-5 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioB-M_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioB-M 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioC-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioC-3 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioC-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioC-5 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioDn-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioDn-3 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-BioDn-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-BioDn-5 9102 // biotin biosynthesis // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation /// 9236 // cobalamin biosynthesis // inferred from electronic annotation 4015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 8483 // transaminase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 30170 // pyridoxal phosphate binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4076 // biotin synthase activity // inferred from electronic annotation /// 5506 // iron ion binding // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 51536 // iron-sulfur cluster binding // inferred from electronic annotation /// 51537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 51539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 8710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 16769 // transferase activity, transferring nitrogenous groups // inferred from electronic annotation /// 8168 // methyltransferase activity // inferred from electronic annotation /// 8757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 4141 // dethiobiotin synthase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 42242 // cobyrinic acid a,c-diamide synthase activity // inferred from electronic annotation -- Control sequence
AFFX-CreX-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-CreX-3 6310 // DNA recombination // inferred from electronic annotation /// 6313 // DNA transposition // inferred from electronic annotation /// 15074 // DNA integration // inferred from electronic annotation 3677 // DNA binding // inferred from electronic annotation -- Control sequence
AFFX-CreX-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-CreX-5 6310 // DNA recombination // inferred from electronic annotation /// 6313 // DNA transposition // inferred from electronic annotation /// 15074 // DNA integration // inferred from electronic annotation 3677 // DNA binding // inferred from electronic annotation -- Control sequence
AFFX-DapX-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-DapX-3 6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6464 // protein modification // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation /// 19877 // diaminopimelate biosynthesis // inferred from electronic annotation /// 1680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 6396 // RNA processing // inferred from electronic annotation /// 8033 // tRNA processing // inferred from electronic annotation /// 42245 // RNA repair // inferred from electronic annotation /// 19242 // methylglyoxal biosynthesis // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation 5737 // cytoplasm // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation 3677 // DNA binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 16564 // transcriptional repressor activity // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 8839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 49 // tRNA binding // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 3723 // RNA binding // inferred from electronic annotation /// 4810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 16779 // nucleotidyltransferase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 8929 // methylglyoxal synthase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation -- Control sequence
AFFX-DapX-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-DapX-5 6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6464 // protein modification // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation /// 19877 // diaminopimelate biosynthesis // inferred from electronic annotation /// 1680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 6396 // RNA processing // inferred from electronic annotation /// 8033 // tRNA processing // inferred from electronic annotation /// 42245 // RNA repair // inferred from electronic annotation /// 19242 // methylglyoxal biosynthesis // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation 5737 // cytoplasm // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation 3677 // DNA binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 16564 // transcriptional repressor activity // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 8839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 49 // tRNA binding // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 3723 // RNA binding // inferred from electronic annotation /// 4810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 16779 // nucleotidyltransferase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 8929 // methylglyoxal synthase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation -- Control sequence
AFFX-DapX-M_at Poplar Aug 16, 2006 Consensus sequence AFFX-DapX-M 6350 // transcription // inferred from electronic annotation /// 6355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 6464 // protein modification // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation /// 19877 // diaminopimelate biosynthesis // inferred from electronic annotation /// 1680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 6396 // RNA processing // inferred from electronic annotation /// 8033 // tRNA processing // inferred from electronic annotation /// 42245 // RNA repair // inferred from electronic annotation /// 19242 // methylglyoxal biosynthesis // inferred from electronic annotation /// 9058 // biosynthesis // inferred from electronic annotation 5737 // cytoplasm // inferred from electronic annotation /// 16020 // membrane // inferred from electronic annotation /// 16021 // integral to membrane // inferred from electronic annotation 3677 // DNA binding // inferred from electronic annotation /// 3824 // catalytic activity // inferred from electronic annotation /// 4077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 16564 // transcriptional repressor activity // inferred from electronic annotation /// 16874 // ligase activity // inferred from electronic annotation /// 8839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 16491 // oxidoreductase activity // inferred from electronic annotation /// 49 // tRNA binding // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 287 // magnesium ion binding // inferred from electronic annotation /// 3723 // RNA binding // inferred from electronic annotation /// 4810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 5524 // ATP binding // inferred from electronic annotation /// 16437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 16779 // nucleotidyltransferase activity // inferred from electronic annotation /// 46872 // metal ion binding // inferred from electronic annotation /// 8929 // methylglyoxal synthase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation -- Control sequence
AFFX-LysX-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-LysX-3 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation 3824 // catalytic activity // inferred from electronic annotation /// 8836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16831 // carboxy-lyase activity // inferred from electronic annotation -- Control sequence
AFFX-LysX-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-LysX-5 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation 3824 // catalytic activity // inferred from electronic annotation /// 8836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16831 // carboxy-lyase activity // inferred from electronic annotation -- Control sequence
AFFX-LysX-M_at Poplar Aug 16, 2006 Consensus sequence AFFX-LysX-M 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9085 // lysine biosynthesis // inferred from electronic annotation /// 9089 // lysine biosynthesis via diaminopimelate // inferred from electronic annotation 3824 // catalytic activity // inferred from electronic annotation /// 8836 // diaminopimelate decarboxylase activity // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation /// 16831 // carboxy-lyase activity // inferred from electronic annotation -- Control sequence
AFFX-PheX-3_at Poplar Aug 16, 2006 Consensus sequence AFFX-PheX-3 30435 // sporulation // inferred from electronic annotation /// 50896 // response to stimulus // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9073 // aromatic amino acid family biosynthesis // inferred from electronic annotation /// 9094 // L-phenylalanine biosynthesis // inferred from electronic annotation 5622 // intracellular // inferred from electronic annotation 16301 // kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 5525 // GTP binding // inferred from electronic annotation /// 4664 // prephenate dehydratase activity // inferred from electronic annotation /// 16597 // amino acid binding // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation -- Control sequence
AFFX-PheX-5_at Poplar Aug 16, 2006 Consensus sequence AFFX-PheX-5 30435 // sporulation // inferred from electronic annotation /// 50896 // response to stimulus // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9073 // aromatic amino acid family biosynthesis // inferred from electronic annotation /// 9094 // L-phenylalanine biosynthesis // inferred from electronic annotation 5622 // intracellular // inferred from electronic annotation 16301 // kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 5525 // GTP binding // inferred from electronic annotation /// 4664 // prephenate dehydratase activity // inferred from electronic annotation /// 16597 // amino acid binding // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation -- Control sequence
AFFX-PheX-M_at Poplar Aug 16, 2006 Consensus sequence AFFX-PheX-M 30435 // sporulation // inferred from electronic annotation /// 50896 // response to stimulus // inferred from electronic annotation /// 8152 // metabolism // inferred from electronic annotation /// 8652 // amino acid biosynthesis // inferred from electronic annotation /// 9073 // aromatic amino acid family biosynthesis // inferred from electronic annotation /// 9094 // L-phenylalanine biosynthesis // inferred from electronic annotation 5622 // intracellular // inferred from electronic annotation 16301 // kinase activity // inferred from electronic annotation /// 16740 // transferase activity // inferred from electronic annotation /// 166 // nucleotide binding // inferred from electronic annotation /// 5525 // GTP binding // inferred from electronic annotation /// 4664 // prephenate dehydratase activity // inferred from electronic annotation /// 16597 // amino acid binding // inferred from electronic annotation /// 16829 // lyase activity // inferred from electronic annotation -- Control sequence
AFFX-Ptp-actin-3_s_at CV242350 Poplar Aug 16, 2006 Consensus sequence CV242350 -- Control sequence
AFFX-Ptp-actin-5_at CV242350 Poplar Aug 16, 2006 Consensus sequence CV242350 -- Control sequence

Total number of rows: 61413

Table truncated, full table size 5288 Kbytes.




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