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Series GSE5887 Query DataSets for GSE5887
Status Public on Mar 18, 2007
Title Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
Platform organisms Pseudomonas aeruginosa; Populus sp.
Sample organisms Pseudomonas aeruginosa; Populus
Experiment type Expression profiling by array
Summary Pseudomonas aeruginosa PAO1 contacted with and without poplar roots gene expression Poplar contacted with and without PAO1 gene expression. All samples cultured in 1 x hrp + 0.25 % sucrose
Keywords: Contact with different species
Overall design Strains: P. aeruginosa PAO1 WT
Medium: 1 x hrp + 0.25 % sucrose
Biofilm grown on poplar root compared to biofilm grown on glasswool
Poplar roots grown
Contributor(s) Wood TK, Attila C, Ueda A
Citation(s) 21261818
Submission date Sep 20, 2006
Last update date Jul 06, 2016
Contact name Can Attila
Organization name Texas A&M University
Department Chemical Eng
Street address 524 Jack E. Brown Bldg.
City College Station
State/province TX
ZIP/Postal code 77843
Country USA
Platforms (2)
GPL84 [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array
GPL4359 [Poplar] Affymetrix Poplar Genome Array
Samples (4)
GSM136932 PAO1 on poplar root 48 hr
GSM136934 PAO1 on glasswool 1 x hrp + 0.25 % sucrose 48 hr biofilm cells
GSM136936 Poplar in 1 x hrp + 0.25 % sucrose no bacteria
BioProject PRJNA97309

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