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REST RE1 silencing transcription factor [ Canis lupus familiaris (dog) ]

Gene ID: 482163, updated on 5-Mar-2024

Summary

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Official Symbol
RESTprovided by VGNC
Official Full Name
RE1 silencing transcription factorprovided by VGNC
Primary source
VGNC:VGNC:45480
See related
Ensembl:ENSCAFG00845013968
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (49654746..49677219)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (48930954..48953349)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (49801275..49823781)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (49327159..49349567)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (48856606..48878993)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098472 Neighboring gene U5 spliceosomal RNA Neighboring gene nitric oxide associated 1 Neighboring gene RNA polymerase II subunit B Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RE1-silencing transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    49654746..49677219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038685736.1 → XP_038541664.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  2. XM_038685734.1 → XP_038541662.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_038685733.1 → XP_038541661.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Related
    ENSCAFP00845019641.1, ENSCAFT00845024970.1
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  4. XM_038685735.1 → XP_038541663.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    49327159..49349567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493880.1 → XP_038349808.1  RE1-silencing transcription factor

    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  2. XM_038493878.1 → XP_038349806.1  RE1-silencing transcription factor

    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_038493877.1 → XP_038349805.1  RE1-silencing transcription factor

    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  4. XM_038493879.1 → XP_038349807.1  RE1-silencing transcription factor

    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    48856606..48878993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620118.1 → XP_038476046.1  RE1-silencing transcription factor

  2. XM_038620116.1 → XP_038476044.1  RE1-silencing transcription factor

  3. XM_038620115.1 → XP_038476043.1  RE1-silencing transcription factor

  4. XM_038620117.1 → XP_038476045.1  RE1-silencing transcription factor

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    49801275..49823781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556183.1 → XP_038412111.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  2. XM_038556185.1 → XP_038412113.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_038556184.1 → XP_038412112.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  4. XM_038556186.1 → XP_038412114.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48930954..48953349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425970.1 → XP_038281898.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  2. XM_038425956.1 → XP_038281884.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_539282.6 → XP_539282.3  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain

  4. XM_038425962.1 → XP_038281890.1  RE1-silencing transcription factor

    UniProtKB/TrEMBL
    A0A8C0LUB6, A0A8C0PCZ3, A0A8C0T437, A0A8I3NUB7
    Conserved Domains (6) summary
    PHA03247
    Location:602 → 711
    PHA03247; large tegument protein UL36; Provisional
    PHA03369
    Location:594 → 817
    PHA03369; capsid maturational protease; Provisional
    sd00017
    Location:277 → 297
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam03154
    Location:471 → 707
    Atrophin-1; Atrophin-1 family
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:303 → 327
    zf-H2C2_5; C2H2-type zinc-finger domain
Nucleotide Protein
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