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Sp5 Sp5 transcription factor [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110549824, updated on 15-Mar-2024

Summary

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Gene symbol
Sp5
Gene description
Sp5 transcription factor
See related
EnsemblRapid:ENSMUGG00015019937
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 8 NC_083356.1 (121809711..121813082, complement)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018657987.1 (365687..367639)

Chromosome 8 - NC_083356.1Genomic Context describing neighboring genes Neighboring gene glutamate rich 2 Neighboring gene uncharacterized LOC132656073 Neighboring gene myosin-IIIb Neighboring gene myosin-IIIb-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Sp5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083356.1 Reference Bangor_MerUng_6.1

    Range
    121809711..121813082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021639222.2 → XP_021494897.1  transcription factor Sp5 isoform X2

    Related
    ENSMUGP00015028235.1, ENSMUGT00015036360.1
    Conserved Domains (3) summary
    COG5048
    Location:312 → 385
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:302 → 321
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:343 → 366
    zf-H2C2_2; Zinc-finger double domain

  2. XM_060390482.1 → XP_060246465.1  transcription factor Sp5 isoform X1

    Related
    ENSMUGP00015028226.1, ENSMUGT00015036350.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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