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Camk2b calcium/calmodulin dependent protein kinase II beta [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833722, updated on 8-Mar-2024

Summary

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Gene symbol
Camk2b
Gene description
calcium/calmodulin dependent protein kinase II beta
See related
EnsemblRapid:ENSMAUG00000019715
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429190.1 (9991787..10081110)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801842.1 (441018..531586, complement)

NW_024429190.1Genomic Context describing neighboring genes Neighboring gene NudC domain containing 3 Neighboring gene uncharacterized LOC121140661 Neighboring gene uncharacterized LOC121140758 Neighboring gene 40S ribosomal protein S24-like Neighboring gene YKT6 v-SNARE homolog Neighboring gene glucokinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429190.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    9991787..10081110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040746723.1 → XP_040602657.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:485 → 612
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  2. XM_040746724.1 → XP_040602658.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X2

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:470 → 597
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  3. XM_040746725.1 → XP_040602659.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X3

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:461 → 588
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  4. XM_040746727.1 → XP_040602661.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X5

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:446 → 573
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  5. XM_040746726.1 → XP_040602660.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X4

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:460 → 587
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  6. XM_040746728.1 → XP_040602662.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X6

    Conserved Domains (2) summary
    cd14086
    Location:97 → 378
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:445 → 572
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  7. XM_005086758.3 → XP_005086815.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X13

    UniProtKB/TrEMBL
    A0A1U7R3L0
    Related
    ENSMAUP00000022309.1, ENSMAUT00000026307.2
    Conserved Domains (3) summary
    smart00220
    Location:14 → 272
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:534 → 661
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  8. XM_005086760.3 → XP_005086817.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X7

    See identical proteins and their annotated locations for XP_005086817.1

    UniProtKB/TrEMBL
    A0A1U7RE25
    Related
    ENSMAUP00000042437.1, ENSMAUT00000068839.1
    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:410 → 537
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  9. XM_040746729.1 → XP_040602663.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X9

    Related
    ENSMAUP00000022311.2, ENSMAUT00000026309.2
    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:386 → 513
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  10. XM_040746731.1 → XP_040602665.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X11

    Related
    ENSMAUP00000022345.1, ENSMAUT00000026343.2
    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:371 → 498
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  11. XM_040746730.1 → XP_040602664.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X10

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:385 → 512
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  12. XM_040746732.1 → XP_040602666.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X12

    Related
    ENSMAUP00000022330.1, ENSMAUT00000026328.2
    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:370 → 497
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  13. XM_021223441.1 → XP_021079100.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X8

    UniProtKB/TrEMBL
    A0A3Q0CAA2
    Conserved Domains (2) summary
    cd14086
    Location:17 → 298
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:405 → 532
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
Nucleotide Protein
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