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CDC27 cell division cycle 27 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100413185, updated on 8-Mar-2024

Summary

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Gene symbol
CDC27
Gene description
cell division cycle 27
See related
Ensembl:ENSCJAG00000019890
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (83002936..83076328, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (85752968..85826359, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein tau Neighboring gene saitohin Neighboring gene KAT8 regulatory NSL complex subunit 1 Neighboring gene uncharacterized protein FLJ46347-like Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene small nucleolar RNA U13 Neighboring gene myosin light chain 4 Neighboring gene U6 spliceosomal RNA Neighboring gene integrin subunit beta 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle protein 27 homolog
Names
cell division cycle 27 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    83002936..83076328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035300282.2 → XP_035156173.1  cell division cycle protein 27 homolog isoform X7

    Conserved Domains (3) summary
    COG0457
    Location:500 → 760
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:566 → 594
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  2. XM_008996848.4 → XP_008995096.1  cell division cycle protein 27 homolog isoform X4

    See identical proteins and their annotated locations for XP_008995096.1

    UniProtKB/TrEMBL
    F6Z1L9, U3CSN8
    Conserved Domains (3) summary
    COG0457
    Location:500 → 761
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:566 → 594
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  3. XM_035300281.2 → XP_035156172.1  cell division cycle protein 27 homolog isoform X6

    Conserved Domains (3) summary
    COG0457
    Location:501 → 761
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:567 → 595
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  4. XM_002748117.5 → XP_002748163.1  cell division cycle protein 27 homolog isoform X3

    See identical proteins and their annotated locations for XP_002748163.1

    UniProtKB/TrEMBL
    F6YJH8, F6Z1L9, U3DII1
    Related
    ENSCJAP00000039577.2
    Conserved Domains (3) summary
    COG0457
    Location:501 → 762
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:567 → 595
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

  5. XM_008996847.4 → XP_008995095.1  cell division cycle protein 27 homolog isoform X2

    UniProtKB/TrEMBL
    F6Z1L9
    Related
    ENSCJAP00000037038.1
    Conserved Domains (5) summary
    COG0457
    Location:506 → 767
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:572 → 600
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:640 → 672
    TPR_1; Tetratricopeptide repeat
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    pfam13424
    Location:463 → 533
    TPR_12; Tetratricopeptide repeat

  6. XM_054255969.1 → XP_054111944.1  cell division cycle protein 27 homolog isoform X5

  7. XM_002748118.5 → XP_002748164.1  cell division cycle protein 27 homolog isoform X1

    See identical proteins and their annotated locations for XP_002748164.1

    UniProtKB/TrEMBL
    F6Z1L9, F7HF23, U3E8G7
    Related
    ENSCJAP00000037042.2
    Conserved Domains (3) summary
    COG0457
    Location:507 → 768
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:573 → 601
    TPR; TPR repeat [structural motif]
    pfam12895
    Location:17 → 92
    ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
Nucleotide Protein
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