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    CHD6 chromodomain helicase DNA binding protein 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 477230, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CHD6provided by VGNC
    Official Full Name
    chromodomain helicase DNA binding protein 6provided by VGNC
    Primary source
    VGNC:VGNC:39204
    See related
    Ensembl:ENSCAFG00845010958
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 24
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (30102193..30305887, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (29042568..29246480, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (29971008..30174849, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (29370977..29574934, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (29474474..29678500, complement)

    Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111092095 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene elastin microfibril interfacer 3 Neighboring gene lipin 3 Neighboring gene uncharacterized LOC106557658 Neighboring gene 60S ribosomal protein L39-like Neighboring gene uncharacterized LOC111092260 Neighboring gene uncharacterized LOC119865668

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromodomain-helicase-DNA-binding protein 6
    XP_013962489.1
    XP_013962490.1
    XP_038289777.1
    XP_038289778.1
    XP_038289779.1
    XP_038289780.1
    XP_038289781.1
    XP_038289782.1
    XP_038313478.1
    XP_038313479.1
    XP_038313480.1
    XP_038313481.1
    XP_038364925.1
    XP_038364926.1
    XP_038364928.1
    XP_038364929.1
    XP_038364930.1
    XP_038364931.1
    XP_038428261.1
    XP_038428262.1
    XP_038428263.1
    XP_038428264.1
    XP_038428265.1
    XP_038428266.1
    XP_038492514.1
    XP_038492515.1
    XP_038492517.1
    XP_038492518.1
    XP_038492519.1
    XP_038492520.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051828.1 Reference ROS_Cfam_1.0

      Range
      30102193..30305887 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038433853.1 → XP_038289781.1  chromodomain-helicase-DNA-binding protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBA4
      Conserved Domains (5) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    2. XM_038433849.1 → XP_038289777.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MQG3, A0A8I3NHF4, A0A8P0PEQ5
      Related
      ENSCAFP00845015314.1, ENSCAFT00845019580.1
      Conserved Domains (6) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2402 → 2432
      BRK; BRK domain

    3. XM_038433852.1 → XP_038289780.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8I3NH23
      Related
      ENSCAFP00845015156.1, ENSCAFT00845019385.1
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    4. XM_038433850.1 → XP_038289778.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MQG3, A0A8I3NHF4, A0A8P0PEQ5
      Conserved Domains (6) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2402 → 2432
      BRK; BRK domain

    5. XM_038433851.1 → XP_038289779.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8I3NH23
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    6. XM_038433854.1 → XP_038289782.1  chromodomain-helicase-DNA-binding protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Z3Z3
      Conserved Domains (5) summary
      PTZ00449
      Location:106 → 373
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049284.1 Alternate UMICH_Zoey_3.1

      Range
      29370977..29574934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038509002.1 → XP_038364930.1  chromodomain-helicase-DNA-binding protein 6 isoform X3

      Conserved Domains (5) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    2. XM_038508997.1 → XP_038364925.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

    3. XM_038509001.1 → XP_038364929.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    4. XM_038508998.1 → XP_038364926.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

    5. XM_038509000.1 → XP_038364928.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    6. XM_038509003.1 → XP_038364931.1  chromodomain-helicase-DNA-binding protein 6 isoform X4

      Conserved Domains (5) summary
      PTZ00449
      Location:106 → 373
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

      Range
      29474474..29678500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038636591.1 → XP_038492519.1  chromodomain-helicase-DNA-binding protein 6 isoform X3

      Conserved Domains (5) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    2. XM_038636586.1 → XP_038492514.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      Conserved Domains (6) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2402 → 2432
      BRK; BRK domain

    3. XM_038636590.1 → XP_038492518.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    4. XM_038636587.1 → XP_038492515.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      Conserved Domains (6) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2402 → 2432
      BRK; BRK domain

    5. XM_038636589.1 → XP_038492517.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    6. XM_038636592.1 → XP_038492520.1  chromodomain-helicase-DNA-binding protein 6 isoform X4

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

      Range
      29971008..30174849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038572337.1 → XP_038428265.1  chromodomain-helicase-DNA-binding protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBA4, A0A8P0NBC8
      Conserved Domains (5) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    2. XM_038572333.1 → XP_038428261.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MPJ2, A0A8C0MQG3, A0A8P0NQK3, A0A8P0PEQ5

    3. XM_038572336.1 → XP_038428264.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8C0T9T8, A0A8P0SYV6
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    4. XM_038572334.1 → XP_038428262.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MPJ2, A0A8C0MQG3, A0A8P0NQK3, A0A8P0PEQ5

    5. XM_038572335.1 → XP_038428263.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8C0T9T8, A0A8P0SYV6
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    6. XM_038572338.1 → XP_038428266.1  chromodomain-helicase-DNA-binding protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Z3Z3
      Conserved Domains (5) summary
      PTZ00449
      Location:106 → 373
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      29042568..29246480 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038457552.1 → XP_038313480.1  chromodomain-helicase-DNA-binding protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TBA4, A0A8P0NBC8
      Conserved Domains (5) summary
      PTZ00121
      Location:65 → 269
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6

    2. XM_014107015.3 → XP_013962490.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MPJ2, A0A8C0MQG3, A0A8P0NQK3, A0A8P0PEQ5
      Conserved Domains (5) summary
      pfam00385
      Location:375 → 429
      Chromo; Chromo (CHRromatin Organisation MOdifier) domain
      pfam10243
      Location:111 → 232
      MIP-T3; Microtubule-binding protein MIP-T3
      cl02688
      Location:2402 → 2432
      BRK; BRK domain
      cl25751
      Location:106 → 373
      DUF4045; Domain of unknown function (DUF4045)
      cl26465
      Location:460 → 985
      SNF2_N; SNF2 family N-terminal domain

    3. XM_038457551.1 → XP_038313479.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8C0T9T8, A0A8P0SYV6
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    4. XM_014107014.3 → XP_013962489.1  chromodomain-helicase-DNA-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MPJ2, A0A8C0MQG3, A0A8P0NQK3, A0A8P0PEQ5
      Conserved Domains (5) summary
      pfam00385
      Location:375 → 429
      Chromo; Chromo (CHRromatin Organisation MOdifier) domain
      pfam10243
      Location:111 → 232
      MIP-T3; Microtubule-binding protein MIP-T3
      cl02688
      Location:2402 → 2432
      BRK; BRK domain
      cl25751
      Location:106 → 373
      DUF4045; Domain of unknown function (DUF4045)
      cl26465
      Location:460 → 985
      SNF2_N; SNF2 family N-terminal domain

    5. XM_038457550.1 → XP_038313478.1  chromodomain-helicase-DNA-binding protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KK17, A0A8C0T9T8, A0A8P0SYV6
      Conserved Domains (6) summary
      PTZ00121
      Location:63 → 267
      PTZ00121; MAEBL; Provisional
      PLN03142
      Location:458 → 983
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:370 → 428
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:286 → 351
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:459 → 680
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
      cl02688
      Location:2400 → 2430
      BRK; BRK domain

    6. XM_038457553.1 → XP_038313481.1  chromodomain-helicase-DNA-binding protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Z3Z3
      Conserved Domains (5) summary
      PTZ00449
      Location:106 → 373
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PLN03142
      Location:460 → 985
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18663
      Location:372 → 430
      CD2_tandem_CHD5-9_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18668
      Location:288 → 353
      CD1_tandem_CHD5-9_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 5-9, and similar proteins
      cd18058
      Location:461 → 682
      DEXHc_CHD6; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 6
    Nucleotide Protein
    Heading Accession and Version

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