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    Rps27a ribosomal protein S27a [ Mus caroli (Ryukyu mouse) ]

    Gene ID: 110305141, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Rps27a
    Gene description
    ribosomal protein S27a
    See related
    Ensembl:MGP_CAROLIEiJ_G0016159
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus caroli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Orthologs
    human mouse all
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    Genomic context

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    See Rps27a in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 11 NC_034580.1 (25178268..25180456, complement)

    Chromosome 11 - NC_034580.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110304343 Neighboring gene mitochondrial translational initiation factor 2 Neighboring gene 60S ribosomal protein L7-like Neighboring gene clathrin heavy chain linker domain containing 1 Neighboring gene uncharacterized LOC110304346

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034580.1 Chromosome 11 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tag activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modification-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-40S ribosomal protein S27a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAROLI_EIJ_v1.1 Primary Assembly

    Genomic

    1. NC_034580.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

      Range
      25178268..25180456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021176940.2 → XP_021032599.1  ubiquitin-40S ribosomal protein S27a

      UniProtKB/TrEMBL
      A0A6P5QUL4
      Related
      MGP_CAROLIEiJ_P0025992, MGP_CAROLIEiJ_T0025992.1
      Conserved Domains (2) summary
      cd01803
      Location:1 → 76
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
      pfam01599
      Location:103 → 147
      Ribosomal_S27; Ribosomal protein S27a
    Nucleotide Protein
    Heading Accession and Version

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