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EGR2 early growth response 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 745846, updated on 2-Nov-2023

Summary

Official Symbol
EGR2provided by VGNC
Official Full Name
early growth response 2provided by VGNC
Primary source
VGNC:VGNC:12319
Locus tag
CK820_G0008057
See related
Ensembl:ENSPTRG00000002538
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See EGR2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (65675596..65682268, complement)

Chromosome 10 - NC_072408.1Genomic Context describing neighboring genes Neighboring gene talanin Neighboring gene uncharacterized LOC107966925 Neighboring gene 2-aminoethanethiol dioxygenase Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072408.1 Chromosome 10 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General protein information

Preferred Names
E3 SUMO-protein ligase EGR2
Names
early growth response 2 (Krox-20 homolog, Drosophila)
early growth response 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072408.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    65675596..65682268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054659656.1XP_054515631.1  E3 SUMO-protein ligase EGR2 isoform X2

  2. XM_009458533.4XP_009456808.1  E3 SUMO-protein ligase EGR2 isoform X1

    See identical proteins and their annotated locations for XP_009456808.1

    UniProtKB/TrEMBL
    A0A2J8NVB1, A0A6D2X5Z5, H2Q1Y5
    Related
    ENSPTRP00000004374.2
    Conserved Domains (4) summary
    COG5048
    Location:368436
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:342364
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:340364
    zf-C2H2; Zinc finger, C2H2 type
    pfam11928
    Location:94166
    DUF3446; Domain of unknown function (DUF3446)