U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTPRD protein tyrosine phosphatase receptor type D [ Homo sapiens (human) ]

Gene ID: 5789, updated on 10-Dec-2024

Summary

Official Symbol
PTPRDprovided by HGNC
Official Full Name
protein tyrosine phosphatase receptor type Dprovided by HGNC
Primary source
HGNC:HGNC:9668
See related
Ensembl:ENSG00000153707 MIM:601598; AllianceGenome:HGNC:9668
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HPTP; PTPD; HPTPD; HPTPDELTA; RPTPDELTA; R-PTP-delta
Summary
The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP contains an extracellular region, a single transmembrane segment and two tandem intracytoplasmic catalytic domains, and thus represents a receptor-type PTP. The extracellular region of this protein is composed of three Ig-like and eight fibronectin type III-like domains. Studies of the similar genes in chicken and fly suggest the role of this PTP is in promoting neurite growth, and regulating neurons axon guidance. Multiple alternatively spliced transcript variants of this gene have been reported. A related pseudogene has been identified on chromosome 5. [provided by RefSeq, Jan 2010]
Expression
Broad expression in brain (RPKM 18.0), kidney (RPKM 8.8) and 14 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PTPRD in Genome Data Viewer
Location:
9p24.1-p23
Exon count:
51
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (8314246..10613002, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (8320802..10622316, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (8314246..10613002, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:7799542-7800088 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:7879626-7880126 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:7880127-7880627 Neighboring gene uncharacterized LOC105375971 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28213 Neighboring gene VISTA enhancer hs304 Neighboring gene distal membrane arm assembly component 1 Neighboring gene Sharpr-MPRA regulatory region 3353 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:8485393-8486592 Neighboring gene NANOG hESC enhancer GRCh37_chr9:8514616-8515117 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:8600067-8600567 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:8643271-8644250 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:8644251-8645230 Neighboring gene ribosomal protein L18a pseudogene 11 Neighboring gene RNA, U7 small nuclear 185 pseudogene Neighboring gene PTPRD antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 1388 Neighboring gene ribosomal protein S26 pseudogene 3 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:9556889-9557562 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:9577422-9577610 Neighboring gene RNA, 7SL, cytoplasmic 5, pseudogene Neighboring gene uncharacterized LOC105375972 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:9914591-9915090 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:9998786-9999985 Neighboring gene NANOG hESC enhancer GRCh37_chr9:10011672-10012190 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19773 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:10633883-10634384 Neighboring gene PTPRD divergent transcript Neighboring gene IMP3 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study and biological pathway analysis of epilepsy prognosis in a prospective cohort of newly treated epilepsy.
EBI GWAS Catalog
A genome-wide association study identifies susceptibility variants for type 2 diabetes in Han Chinese.
EBI GWAS Catalog
A genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
EBI GWAS Catalog
A genome-wide meta-analysis of association studies of Cloninger's Temperament Scales.
EBI GWAS Catalog
Common genetic variation and susceptibility to partial epilepsies: a genome-wide association study.
EBI GWAS Catalog
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
EBI GWAS Catalog
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
EBI GWAS Catalog
Genome-wide association and meta-analysis in populations from Starr County, Texas, and Mexico City identify type 2 diabetes susceptibility loci and enrichment for expression quantitative trait loci in top signals.
EBI GWAS Catalog
Genome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction.
EBI GWAS Catalog
Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortiu
EBI GWAS Catalog
Genome-wide association study identifies novel restless legs syndrome susceptibility loci on 2p14 and 16q12.1.
EBI GWAS Catalog
Genome-wide association study in obsessive-compulsive disorder: results from the OCGAS.
EBI GWAS Catalog
Genome-wide association study of co-occurring anxiety in major depression.
EBI GWAS Catalog
Genome-Wide Association Study of Primary Dentition Pit-and-Fissure and Smooth Surface Caries.
EBI GWAS Catalog
Genome-wide association study of the five-factor model of personality in young Korean women.
EBI GWAS Catalog
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in response to agonists.
EBI GWAS Catalog
Genome-wide meta-analysis identifies new susceptibility loci for migraine.
EBI GWAS Catalog
Genome-wide SNP associations with rubella-specific cytokine responses in measles-mumps-rubella vaccine recipients.
EBI GWAS Catalog
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
EBI GWAS Catalog
PTPRD (protein tyrosine phosphatase receptor type delta) is associated with restless legs syndrome.
EBI GWAS Catalog

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC119750, MGC119751, MGC119752, MGC119753

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables cell adhesion molecule binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables histone H2AXY142 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables non-membrane spanning protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein tyrosine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein tyrosine phosphatase activity, metal-dependent IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables transmembrane receptor protein tyrosine phosphatase activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine phosphatase signaling pathway TAS
Traceable Author Statement
more info
PubMed 
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to platelet-derived growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 
involved_in nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuron differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in phosphate-containing compound metabolic process NAS
Non-traceable Author Statement
more info
PubMed 
involved_in positive regulation of dendritic spine morphogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of synapse assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in presynapse assembly IDA
Inferred from Direct Assay
more info
PubMed 
involved_in presynapse assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in presynaptic membrane assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of postsynaptic density assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in synaptic membrane adhesion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in synaptic membrane adhesion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in synaptic membrane adhesion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in synaptic membrane adhesion ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in trans-synaptic signaling by trans-synaptic complex IDA
Inferred from Direct Assay
more info
PubMed 
involved_in trans-synaptic signaling by trans-synaptic complex IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Schaffer collateral - CA1 synapse IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular exosome HDA PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in glutamatergic synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in hippocampal mossy fiber to CA3 synapse IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
receptor-type tyrosine-protein phosphatase delta
Names
protein tyrosine phosphatase, receptor type, delta polypeptide
rceptor-type tyrosine-protein phosphatase delta
NP_001035802.1
NP_001164496.1
NP_001364875.1
NP_001364876.1
NP_001364887.1
NP_001364987.1
NP_002830.1
NP_569075.2
NP_569076.2
NP_569077.2
XP_006716880.1
XP_006716886.1
XP_006716888.1
XP_006716890.1
XP_016870447.1
XP_016870450.1
XP_016870452.1
XP_016870453.1
XP_016870454.1
XP_016870455.1
XP_016870456.1
XP_016870457.1
XP_016870458.1
XP_016870459.1
XP_016870460.1
XP_016870461.1
XP_016870463.1
XP_016870465.1
XP_016870466.1
XP_016870467.1
XP_016870468.1
XP_016870469.1
XP_016870471.1
XP_016870472.1
XP_024303393.1
XP_047279597.1
XP_047279598.1
XP_047279599.1
XP_047279600.1
XP_047279601.1
XP_047279602.1
XP_047279603.1
XP_047279604.1
XP_047279605.1
XP_047279606.1
XP_047279607.1
XP_047279608.1
XP_047279609.1
XP_047279610.1
XP_047279611.1
XP_047279612.1
XP_047279613.1
XP_047279614.1
XP_047279615.1
XP_047279616.1
XP_054219364.1
XP_054219365.1
XP_054219366.1
XP_054219367.1
XP_054219368.1
XP_054219369.1
XP_054219370.1
XP_054219371.1
XP_054219372.1
XP_054219373.1
XP_054219374.1
XP_054219375.1
XP_054219376.1
XP_054219377.1
XP_054219378.1
XP_054219379.1
XP_054219380.1
XP_054219381.1
XP_054219382.1
XP_054219383.1
XP_054219384.1
XP_054219385.1
XP_054219386.1
XP_054219387.1
XP_054219388.1
XP_054219389.1
XP_054219390.1
XP_054219391.1
XP_054219392.1
XP_054219393.1
XP_054219394.1
XP_054219395.1
XP_054219396.1
XP_054219397.1
XP_054219398.1
XP_054219399.1
XP_054219400.1
XP_054219401.1
XP_054219402.1
XP_054219403.1
XP_054219404.1
XP_054219405.1
XP_054219406.1
XP_054219407.1
XP_054219408.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033963.1 RefSeqGene

    Range
    4722..2303478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001040712.2NP_001035802.1  receptor-type tyrosine-protein phosphatase delta isoform 5 precursor

    See identical proteins and their annotated locations for NP_001035802.1

    Status: REVIEWED

    Source sequence(s)
    AB208869, AL356584, AL445926, AL590397, BM680342, DR001889
    Consensus CDS
    CCDS55288.1
    UniProtKB/TrEMBL
    F5GWR7
    Related
    ENSP00000380735.3, ENST00000397611.7
    Conserved Domains (8) summary
    cd05738
    Location:143223
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:247315
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:9461201
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132222
    IG_like; Immunoglobulin like
    cd00047
    Location:9721201
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:320409
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  2. NM_001171025.2NP_001164496.1  receptor-type tyrosine-protein phosphatase delta isoform 6 precursor

    See identical proteins and their annotated locations for NP_001164496.1

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL583805, AL590397, AL596451
    Consensus CDS
    CCDS55289.1
    UniProtKB/TrEMBL
    F5GWR7
    Related
    ENSP00000380731.3, ENST00000397606.7
    Conserved Domains (8) summary
    cd05738
    Location:143220
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:240308
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:9491204
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132219
    IG_like; Immunoglobulin like
    cd00047
    Location:9751204
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:313402
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  3. NM_001377946.1NP_001364875.1  receptor-type tyrosine-protein phosphatase delta isoform 7 precursor

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL583805, AL590397, AL596451
    UniProtKB/TrEMBL
    F5GWR7
    Conserved Domains (7) summary
    cd00063
    Location:317406
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:9311214
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:12151506
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127220
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:233314
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  4. NM_001377947.1NP_001364876.1  receptor-type tyrosine-protein phosphatase delta isoform 8 precursor

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL583805, AL590397, AL596451
    UniProtKB/TrEMBL
    F5GWR7
    Conserved Domains (7) summary
    cd00063
    Location:320409
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:9211204
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:12051496
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127223
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:236317
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  5. NM_001377958.1NP_001364887.1  receptor-type tyrosine-protein phosphatase delta isoform 9 precursor

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL583805, AL590397, AL596451
    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (7) summary
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:13541637
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:16381929
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127226
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:239320
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  6. NM_001378058.1NP_001364987.1  receptor-type tyrosine-protein phosphatase delta isoform 10 precursor

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL583805, AL590397, AL596451
    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (7) summary
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:13391622
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:16231914
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127226
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:239320
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  7. NM_002839.4NP_002830.1  receptor-type tyrosine-protein phosphatase delta isoform 1 precursor

    See identical proteins and their annotated locations for NP_002830.1

    Status: REVIEWED

    Source sequence(s)
    AB211400, AL135790, AL356584, AL390723, AL445926, BC028038, BM680342
    Consensus CDS
    CCDS43786.1
    UniProtKB/Swiss-Prot
    B1ALA0, F5GWT7, P23468, Q3KPJ0, Q3KPJ1, Q3KPJ2
    UniProtKB/TrEMBL
    Q2HXI4
    Related
    ENSP00000370593.3, ENST00000381196.9
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13561611
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13821611
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  8. NM_130391.4NP_569075.2  receptor-type tyrosine-protein phosphatase delta isoform 2 precursor

    See identical proteins and their annotated locations for NP_569075.2

    Status: REVIEWED

    Source sequence(s)
    AL137125, AL356584, AL445926, AL451130, AL583805, AL590397
    Consensus CDS
    CCDS6472.2
    UniProtKB/TrEMBL
    F5GWR7
    Related
    ENSP00000417093.1, ENST00000486161.5
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:9491204
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:9751204
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:323412
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  9. NM_130392.3NP_569076.2  receptor-type tyrosine-protein phosphatase delta isoform 3 precursor

    See identical proteins and their annotated locations for NP_569076.2

    Status: REVIEWED

    Source sequence(s)
    AL445926, BC106714, BM680342, DR001889
    Consensus CDS
    CCDS55290.1
    UniProtKB/TrEMBL
    F5GWR7
    Related
    ENSP00000347373.5, ENST00000355233.9
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:9501205
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:9761205
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:323412
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  10. NM_130393.3NP_569077.2  receptor-type tyrosine-protein phosphatase delta isoform 4 precursor

    See identical proteins and their annotated locations for NP_569077.2

    Status: REVIEWED

    Source sequence(s)
    AL445926, AL590397, BC106716, BM680342, DR001889
    Consensus CDS
    CCDS75813.1
    UniProtKB/TrEMBL
    F5GWR7, F5GWY7, Q3KPI9
    Related
    ENSP00000440515.2, ENST00000537002.5
    Conserved Domains (8) summary
    cd05738
    Location:143220
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:244312
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:9401195
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132219
    IG_like; Immunoglobulin like
    cd00047
    Location:9661195
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:317406
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    8314246..10613002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017014961.3XP_016870450.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (7) summary
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:13541637
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:16381929
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127226
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:239320
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  2. XM_006716827.5XP_006716890.1  receptor-type tyrosine-protein phosphatase delta isoform X38

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143217
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:237305
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13371592
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132216
    IG_like; Immunoglobulin like
    cd00047
    Location:13631592
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:900991
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  3. XM_047423649.1XP_047279605.1  receptor-type tyrosine-protein phosphatase delta isoform X28

    UniProtKB/TrEMBL
    Q2HXI4
  4. XM_047423651.1XP_047279607.1  receptor-type tyrosine-protein phosphatase delta isoform X30

    UniProtKB/TrEMBL
    Q2HXI4
  5. XM_047423657.1XP_047279613.1  receptor-type tyrosine-protein phosphatase delta isoform X37

    UniProtKB/TrEMBL
    Q2HXI4
  6. XM_047423653.1XP_047279609.1  receptor-type tyrosine-protein phosphatase delta isoform X33

    UniProtKB/TrEMBL
    Q2HXI4
  7. XM_017014971.3XP_016870460.1  receptor-type tyrosine-protein phosphatase delta isoform X13

    UniProtKB/TrEMBL
    Q2HXI4
  8. XM_024447625.2XP_024303393.1  receptor-type tyrosine-protein phosphatase delta isoform X12

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (6) summary
    cd05739
    Location:243311
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:16561915
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:13951624
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9151006
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd05738
    Location:143223
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
  9. XM_017014966.3XP_016870455.1  receptor-type tyrosine-protein phosphatase delta isoform X6

    UniProtKB/TrEMBL
    Q2HXI4
  10. XM_017014969.3XP_016870458.1  receptor-type tyrosine-protein phosphatase delta isoform X11

    UniProtKB/TrEMBL
    Q2HXI4
  11. XM_047423645.1XP_047279601.1  receptor-type tyrosine-protein phosphatase delta isoform X23

    UniProtKB/TrEMBL
    Q2HXI4
  12. XM_017014967.3XP_016870456.1  receptor-type tyrosine-protein phosphatase delta isoform X7

    UniProtKB/TrEMBL
    Q2HXI4
  13. XM_017014983.3XP_016870472.1  receptor-type tyrosine-protein phosphatase delta isoform X43

    UniProtKB/TrEMBL
    F5GWR7
  14. XM_017014982.3XP_016870471.1  receptor-type tyrosine-protein phosphatase delta isoform X42

    UniProtKB/TrEMBL
    F5GWR7
  15. XM_047423654.1XP_047279610.1  receptor-type tyrosine-protein phosphatase delta isoform X34

    UniProtKB/TrEMBL
    Q2HXI4
  16. XM_017014980.3XP_016870469.1  receptor-type tyrosine-protein phosphatase delta isoform X31

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13471602
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13731602
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9131004
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  17. XM_047423644.1XP_047279600.1  receptor-type tyrosine-protein phosphatase delta isoform X19

    UniProtKB/TrEMBL
    Q2HXI4
  18. XM_017014974.3XP_016870463.1  receptor-type tyrosine-protein phosphatase delta isoform X15

    UniProtKB/TrEMBL
    Q2HXI4
  19. XM_047423652.1XP_047279608.1  receptor-type tyrosine-protein phosphatase delta isoform X32

    UniProtKB/TrEMBL
    Q2HXI4
  20. XM_047423650.1XP_047279606.1  receptor-type tyrosine-protein phosphatase delta isoform X29

    UniProtKB/TrEMBL
    Q2HXI4
  21. XM_017014977.3XP_016870466.1  receptor-type tyrosine-protein phosphatase delta isoform X17

    UniProtKB/TrEMBL
    Q2HXI4
  22. XM_017014972.3XP_016870461.1  receptor-type tyrosine-protein phosphatase delta isoform X14

    UniProtKB/TrEMBL
    Q2HXI4
  23. XM_047423647.1XP_047279603.1  receptor-type tyrosine-protein phosphatase delta isoform X26

    UniProtKB/TrEMBL
    Q2HXI4
  24. XM_006716817.5XP_006716880.1  receptor-type tyrosine-protein phosphatase delta isoform X5

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13731628
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13991628
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  25. XM_047423642.1XP_047279598.1  receptor-type tyrosine-protein phosphatase delta isoform X9

    UniProtKB/TrEMBL
    Q2HXI4
  26. XM_017014964.3XP_016870453.1  receptor-type tyrosine-protein phosphatase delta isoform X2

    UniProtKB/TrEMBL
    Q2HXI4
  27. XM_006716825.5XP_006716888.1  receptor-type tyrosine-protein phosphatase delta isoform X25

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13561611
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13821611
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  28. XM_017014970.3XP_016870459.1  receptor-type tyrosine-protein phosphatase delta isoform X10

    UniProtKB/TrEMBL
    Q2HXI4
  29. XM_017014979.3XP_016870468.1  receptor-type tyrosine-protein phosphatase delta isoform X21

    UniProtKB/TrEMBL
    Q2HXI4
  30. XM_017014965.3XP_016870454.1  receptor-type tyrosine-protein phosphatase delta isoform X4

    UniProtKB/TrEMBL
    Q2HXI4
  31. XM_006716823.4XP_006716886.1  receptor-type tyrosine-protein phosphatase delta isoform X22

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13571612
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13831612
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  32. XM_017014968.3XP_016870457.1  receptor-type tyrosine-protein phosphatase delta isoform X8

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13711626
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13971626
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  33. XM_017014978.3XP_016870467.1  receptor-type tyrosine-protein phosphatase delta isoform X20

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13611616
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:13871616
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  34. XM_017014963.3XP_016870452.1  receptor-type tyrosine-protein phosphatase delta isoform X3

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (8) summary
    cd05738
    Location:143226
    Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    cd05739
    Location:250318
    Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
    smart00194
    Location:13751630
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:132225
    IG_like; Immunoglobulin like
    cd00047
    Location:14011630
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:41115
    Ig; Immunoglobulin domain
  35. XM_017014976.3XP_016870465.1  receptor-type tyrosine-protein phosphatase delta isoform X18

    UniProtKB/TrEMBL
    Q2HXI4
  36. XM_017014958.3XP_016870447.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
    Conserved Domains (7) summary
    cd00063
    Location:9221013
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd14624
    Location:13541637
    R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1
    cd14628
    Location:16381929
    R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2
    pfam07679
    Location:24115
    I-set; Immunoglobulin I-set domain
    cd00096
    Location:3236
    Ig; Ig strand A' [structural motif]
    cd05738
    Location:127226
    IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains
    cd05739
    Location:239320
    IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
  37. XM_047423641.1XP_047279597.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
  38. XM_047423660.1XP_047279616.1  receptor-type tyrosine-protein phosphatase delta isoform X41

    UniProtKB/TrEMBL
    Q2HXI4
  39. XM_047423659.1XP_047279615.1  receptor-type tyrosine-protein phosphatase delta isoform X40

    UniProtKB/TrEMBL
    Q2HXI4
  40. XM_047423648.1XP_047279604.1  receptor-type tyrosine-protein phosphatase delta isoform X27

    UniProtKB/TrEMBL
    Q2HXI4
  41. XM_047423658.1XP_047279614.1  receptor-type tyrosine-protein phosphatase delta isoform X39

    UniProtKB/TrEMBL
    Q2HXI4
  42. XM_047423646.1XP_047279602.1  receptor-type tyrosine-protein phosphatase delta isoform X24

    UniProtKB/TrEMBL
    Q2HXI4
    Related
    ENST00000651105.1
  43. XM_047423656.1XP_047279612.1  receptor-type tyrosine-protein phosphatase delta isoform X36

    UniProtKB/TrEMBL
    Q2HXI4
  44. XM_047423655.1XP_047279611.1  receptor-type tyrosine-protein phosphatase delta isoform X35

    UniProtKB/TrEMBL
    Q2HXI4
  45. XM_047423643.1XP_047279599.1  receptor-type tyrosine-protein phosphatase delta isoform X16

    UniProtKB/TrEMBL
    Q2HXI4

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    8320802..10622316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054363390.1XP_054219365.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
  2. XM_054363428.1XP_054219403.1  receptor-type tyrosine-protein phosphatase delta isoform X38

    UniProtKB/TrEMBL
    Q2HXI4
  3. XM_054363418.1XP_054219393.1  receptor-type tyrosine-protein phosphatase delta isoform X28

    UniProtKB/TrEMBL
    Q2HXI4
  4. XM_054363420.1XP_054219395.1  receptor-type tyrosine-protein phosphatase delta isoform X30

    UniProtKB/TrEMBL
    Q2HXI4
  5. XM_054363427.1XP_054219402.1  receptor-type tyrosine-protein phosphatase delta isoform X37

    UniProtKB/TrEMBL
    Q2HXI4
  6. XM_054363423.1XP_054219398.1  receptor-type tyrosine-protein phosphatase delta isoform X33

    UniProtKB/TrEMBL
    Q2HXI4
  7. XM_054363403.1XP_054219378.1  receptor-type tyrosine-protein phosphatase delta isoform X13

    UniProtKB/TrEMBL
    Q2HXI4
  8. XM_054363402.1XP_054219377.1  receptor-type tyrosine-protein phosphatase delta isoform X12

    UniProtKB/TrEMBL
    Q2HXI4
  9. XM_054363396.1XP_054219371.1  receptor-type tyrosine-protein phosphatase delta isoform X6

    UniProtKB/TrEMBL
    Q2HXI4
  10. XM_054363401.1XP_054219376.1  receptor-type tyrosine-protein phosphatase delta isoform X11

    UniProtKB/TrEMBL
    Q2HXI4
  11. XM_054363413.1XP_054219388.1  receptor-type tyrosine-protein phosphatase delta isoform X23

    UniProtKB/TrEMBL
    Q2HXI4
  12. XM_054363397.1XP_054219372.1  receptor-type tyrosine-protein phosphatase delta isoform X7

    UniProtKB/TrEMBL
    Q2HXI4
  13. XM_054363433.1XP_054219408.1  receptor-type tyrosine-protein phosphatase delta isoform X43

    UniProtKB/TrEMBL
    F5GWR7
  14. XM_054363432.1XP_054219407.1  receptor-type tyrosine-protein phosphatase delta isoform X42

    UniProtKB/TrEMBL
    F5GWR7
  15. XM_054363424.1XP_054219399.1  receptor-type tyrosine-protein phosphatase delta isoform X34

    UniProtKB/TrEMBL
    Q2HXI4
  16. XM_054363421.1XP_054219396.1  receptor-type tyrosine-protein phosphatase delta isoform X31

    UniProtKB/TrEMBL
    Q2HXI4
  17. XM_054363409.1XP_054219384.1  receptor-type tyrosine-protein phosphatase delta isoform X19

    UniProtKB/TrEMBL
    Q2HXI4
  18. XM_054363405.1XP_054219380.1  receptor-type tyrosine-protein phosphatase delta isoform X15

    UniProtKB/TrEMBL
    Q2HXI4
  19. XM_054363422.1XP_054219397.1  receptor-type tyrosine-protein phosphatase delta isoform X32

    UniProtKB/TrEMBL
    Q2HXI4
  20. XM_054363419.1XP_054219394.1  receptor-type tyrosine-protein phosphatase delta isoform X29

    UniProtKB/TrEMBL
    Q2HXI4
  21. XM_054363407.1XP_054219382.1  receptor-type tyrosine-protein phosphatase delta isoform X17

    UniProtKB/TrEMBL
    Q2HXI4
  22. XM_054363404.1XP_054219379.1  receptor-type tyrosine-protein phosphatase delta isoform X14

    UniProtKB/TrEMBL
    Q2HXI4
  23. XM_054363416.1XP_054219391.1  receptor-type tyrosine-protein phosphatase delta isoform X26

    UniProtKB/TrEMBL
    Q2HXI4
  24. XM_054363395.1XP_054219370.1  receptor-type tyrosine-protein phosphatase delta isoform X5

    UniProtKB/TrEMBL
    Q2HXI4
  25. XM_054363399.1XP_054219374.1  receptor-type tyrosine-protein phosphatase delta isoform X9

    UniProtKB/TrEMBL
    Q2HXI4
  26. XM_054363392.1XP_054219367.1  receptor-type tyrosine-protein phosphatase delta isoform X2

    UniProtKB/TrEMBL
    Q2HXI4
  27. XM_054363415.1XP_054219390.1  receptor-type tyrosine-protein phosphatase delta isoform X25

    UniProtKB/TrEMBL
    Q2HXI4
  28. XM_054363400.1XP_054219375.1  receptor-type tyrosine-protein phosphatase delta isoform X10

    UniProtKB/TrEMBL
    Q2HXI4
  29. XM_054363411.1XP_054219386.1  receptor-type tyrosine-protein phosphatase delta isoform X21

    UniProtKB/TrEMBL
    Q2HXI4
  30. XM_054363394.1XP_054219369.1  receptor-type tyrosine-protein phosphatase delta isoform X4

    UniProtKB/TrEMBL
    Q2HXI4
  31. XM_054363412.1XP_054219387.1  receptor-type tyrosine-protein phosphatase delta isoform X22

    UniProtKB/TrEMBL
    Q2HXI4
  32. XM_054363398.1XP_054219373.1  receptor-type tyrosine-protein phosphatase delta isoform X8

    UniProtKB/TrEMBL
    Q2HXI4
  33. XM_054363410.1XP_054219385.1  receptor-type tyrosine-protein phosphatase delta isoform X20

    UniProtKB/TrEMBL
    Q2HXI4
  34. XM_054363393.1XP_054219368.1  receptor-type tyrosine-protein phosphatase delta isoform X3

    UniProtKB/TrEMBL
    Q2HXI4
  35. XM_054363408.1XP_054219383.1  receptor-type tyrosine-protein phosphatase delta isoform X18

    UniProtKB/TrEMBL
    Q2HXI4
  36. XM_054363389.1XP_054219364.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
  37. XM_054363391.1XP_054219366.1  receptor-type tyrosine-protein phosphatase delta isoform X1

    UniProtKB/TrEMBL
    Q2HXI4
  38. XM_054363431.1XP_054219406.1  receptor-type tyrosine-protein phosphatase delta isoform X41

    UniProtKB/TrEMBL
    Q2HXI4
  39. XM_054363430.1XP_054219405.1  receptor-type tyrosine-protein phosphatase delta isoform X40

    UniProtKB/TrEMBL
    Q2HXI4
  40. XM_054363417.1XP_054219392.1  receptor-type tyrosine-protein phosphatase delta isoform X27

    UniProtKB/TrEMBL
    Q2HXI4
  41. XM_054363429.1XP_054219404.1  receptor-type tyrosine-protein phosphatase delta isoform X39

    UniProtKB/TrEMBL
    Q2HXI4
  42. XM_054363414.1XP_054219389.1  receptor-type tyrosine-protein phosphatase delta isoform X24

    UniProtKB/TrEMBL
    Q2HXI4
  43. XM_054363426.1XP_054219401.1  receptor-type tyrosine-protein phosphatase delta isoform X36

    UniProtKB/TrEMBL
    Q2HXI4
  44. XM_054363425.1XP_054219400.1  receptor-type tyrosine-protein phosphatase delta isoform X35

    UniProtKB/TrEMBL
    Q2HXI4
  45. XM_054363406.1XP_054219381.1  receptor-type tyrosine-protein phosphatase delta isoform X16

    UniProtKB/TrEMBL
    Q2HXI4