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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278599.2 → NP_001265528.1 tyrosine-protein kinase receptor UFO isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks four alternate exons in the 5' coding region and initiates translation at a downstream AUG, compared to variant 1. It encodes isoform 3 which has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI300772, AI309979, AK309139, CA437238, X66029
- Consensus CDS
-
CCDS62677.1
- UniProtKB/TrEMBL
-
M0R0W6
- Related
- ENSP00000471497.1, ENST00000593513.1
- Conserved Domains (4) summary
-
- smart00221
Location:270 → 535
- STYKc; Protein kinase; unclassified specificity
- cd00063
Location:20 → 60
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05075
Location:267 → 543
- PTKc_Axl; Catalytic domain of the Protein Tyrosine Kinase, Axl
- pfam00041
Location:67 → 150
- fn3; Fibronectin type III domain
-
NM_001699.6 → NP_001690.2 tyrosine-protein kinase receptor UFO isoform 2 precursor
See identical proteins and their annotated locations for NP_001690.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region compared to variant 1. It encodes isoform 2, which lacks an internal segment and is shorter than isoform 1.
- Source sequence(s)
-
AI300772, AI309979, AK309139, AL556721, BC032229, CA437238, HY045208, M76125, X66029
- Consensus CDS
-
CCDS12574.1
- UniProtKB/TrEMBL
-
A0ACI8SS16
- Related
- ENSP00000351995.2, ENST00000359092.7
- Conserved Domains (7) summary
-
- cd00096
Location:53 → 126
- Ig; Immunoglobulin domain
- cd05749
Location:141 → 222
- Ig2_Tyro3_like; Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)
- smart00221
Location:529 → 794
- STYKc; Protein kinase; unclassified specificity
- smart00410
Location:145 → 223
- IG_like; Immunoglobulin like
- cd00063
Location:225 → 328
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05075
Location:526 → 802
- PTKc_Axl; Catalytic domain of the Protein Tyrosine Kinase, Axl
- pfam00041
Location:335 → 418
- fn3; Fibronectin type III domain
-
NM_021913.5 → NP_068713.2 tyrosine-protein kinase receptor UFO isoform 1 precursor
See identical proteins and their annotated locations for NP_068713.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AI300772, AI309979, AK309139, AL556721, BC032229, CA437238, HY045208, X66029
- Consensus CDS
-
CCDS12575.1
- UniProtKB/Swiss-Prot
- P30530, Q8N5L2, Q9UD27
- UniProtKB/TrEMBL
-
A0ACI8SS16
- Related
- ENSP00000301178.3, ENST00000301178.9
- Conserved Domains (5) summary
-
- cd05749
Location:141 → 222
- Ig2_Axl_Tyro3_like; Second immunoglobulin (Ig)-like domain of Axl/Tyro3 family receptor tyrosine kinases (RTKs)
- cd00063
Location:225 → 328
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05075
Location:535 → 811
- PTKc_Axl; Catalytic domain of the Protein Tyrosine Kinase, Axl
- pfam00041
Location:335 → 418
- fn3; Fibronectin type III domain
- cd00096
Location:53 → 119
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
41219223..41261766
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
44040107..44082625
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)