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ZNF683 zinc finger protein 683 [ Bos taurus (domestic cattle) ]

Gene ID: 511122, updated on 17-Aug-2024

Summary

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Official Symbol
ZNF683provided by VGNC
Official Full Name
zinc finger protein 683provided by VGNC
Primary source
VGNC:VGNC:37327
See related
BGD:BT17407; Ensembl:ENSBTAG00000009631
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (126761545..126773365)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit K-like Neighboring gene uncharacterized LOC132343610 Neighboring gene crystallin beta-gamma domain containing 2 Neighboring gene CD52 molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tissue-resident T-cell transcription regulator protein ZNF683; zinc finger protein 683

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    126761545..126773365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059879612.1 → XP_059735595.1  tissue-resident T-cell transcription regulator protein ZNF683 isoform X2

    UniProtKB/TrEMBL
    F1MR18

  2. XM_024982506.2 → XP_024838274.1  tissue-resident T-cell transcription regulator protein ZNF683 isoform X2

    UniProtKB/TrEMBL
    F1MR18
    Conserved Domains (2) summary
    COG5048
    Location:315 → 426
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_024982496.2 → XP_024838264.1  tissue-resident T-cell transcription regulator protein ZNF683 isoform X1

    UniProtKB/TrEMBL
    A0AAA9RW67
    Related
    ENSBTAP00000077661.1, ENSBTAT00000119054.1
    Conserved Domains (2) summary
    COG5048
    Location:343 → 454
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_005203302.5 → XP_005203359.1  tissue-resident T-cell transcription regulator protein ZNF683 isoform X2

    See identical proteins and their annotated locations for XP_005203359.1

    UniProtKB/TrEMBL
    F1MR18
    Related
    ENSBTAP00000012691.4, ENSBTAT00000012691.5
    Conserved Domains (2) summary
    COG5048
    Location:315 → 426
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:322 → 342
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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