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CIPC CLOCK interacting pacemaker [ Canis lupus familiaris (dog) ]

Gene ID: 490802, updated on 5-Mar-2024

Summary

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Official Symbol
CIPCprovided by VGNC
Official Full Name
CLOCK interacting pacemakerprovided by VGNC
Primary source
VGNC:VGNC:39278
See related
Ensembl:ENSCAFG00845006185
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
KIAA1737
Orthologs
human mouse all
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Genomic context

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See CIPC in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (50160377..50180724)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (49614515..49635023)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (50244557..50264886)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (49823175..49843510)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (49846309..49866794)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872908 Neighboring gene uncharacterized LOC102156872 Neighboring gene uncharacterized LOC111097118 Neighboring gene zinc finger DHHC-type palmitoyltransferase 22 Neighboring gene uncharacterized LOC102157068 Neighboring gene transmembrane protein 63C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of circadian rhythm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CLOCK-interacting pacemaker

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    50160377..50180724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674303.1 → XP_038530231.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  2. XM_038674300.1 → XP_038530228.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Related
    ENSCAFP00845008556.1, ENSCAFT00845010963.1
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  3. XM_038674301.1 → XP_038530229.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  4. XM_038674302.1 → XP_038530230.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  5. XM_038674304.1 → XP_038530232.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    49823175..49843510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483897.1 → XP_038339825.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  2. XM_038483894.1 → XP_038339822.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  3. XM_038483895.1 → XP_038339823.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  4. XM_038483896.1 → XP_038339824.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  5. XM_038483898.1 → XP_038339826.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    49846309..49866794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609481.1 → XP_038465409.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  2. XM_038609478.1 → XP_038465406.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  3. XM_038609479.1 → XP_038465407.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  4. XM_038609480.1 → XP_038465408.1  CLOCK-interacting pacemaker

    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    50244557..50264886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545385.1 → XP_038401313.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  2. XM_038545382.1 → XP_038401310.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  3. XM_038545383.1 → XP_038401311.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  4. XM_038545384.1 → XP_038401312.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  5. XM_038545386.1 → XP_038401314.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    49614515..49635023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022422255.1 → XP_022277963.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  2. XM_005623697.3 → XP_005623754.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  3. XM_014116100.3 → XP_013971575.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian

  4. XM_038592314.1 → XP_038448242.1  CLOCK-interacting pacemaker

    UniProtKB/TrEMBL
    A0A8C0JLC9, A0A8C0SSL2, A0A8I3RT49, A0A8P0SVE3
    Conserved Domains (1) summary
    pfam15800
    Location:38 → 376
    CiPC; Clock interacting protein circadian
Nucleotide Protein
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