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PCOLCE procollagen C-endopeptidase enhancer [ Canis lupus familiaris (dog) ]

Gene ID: 489835, updated on 17-Aug-2024

Summary

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Official Symbol
PCOLCEprovided by VGNC
Official Full Name
procollagen C-endopeptidase enhancerprovided by VGNC
Primary source
VGNC:VGNC:44316
See related
Ensembl:ENSCAFG00845001417
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PCOLCE in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (9019351..9025225, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (10789558..10795432, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (9031772..9037646, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (8871854..8877728, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (8849536..8854860, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 3 Neighboring gene uncharacterized LOC111096206 Neighboring gene uncharacterized LOC119872146 Neighboring gene F-box protein 24 Neighboring gene leucine rich repeats and calponin homology domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen C-endopeptidase enhancer 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    9019351..9025225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038668048.1 → XP_038523976.1  procollagen C-endopeptidase enhancer 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YXT5, A0A8I3MFU6
    Related
    ENSCAFP00845001924.1, ENSCAFT00845002423.1
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:348 → 471
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

  2. XM_038668049.1 → XP_038523977.1  procollagen C-endopeptidase enhancer 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
    Related
    ENSCAFP00845001937.1, ENSCAFT00845002438.1
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:323 → 446
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    8871854..8877728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038477997.1 → XP_038333925.1  procollagen C-endopeptidase enhancer 1 isoform X1

    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:348 → 471
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

  2. XM_038477998.1 → XP_038333926.1  procollagen C-endopeptidase enhancer 1 isoform X2

    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:323 → 446
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    8849536..8854860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603343.1 → XP_038459271.1  procollagen C-endopeptidase enhancer 1 isoform X2

    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:323 → 446
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    9031772..9037646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038539262.1 → XP_038395190.1  procollagen C-endopeptidase enhancer 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YXT5, A0A8I3MFU6
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:348 → 471
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

  2. XM_038539263.1 → XP_038395191.1  procollagen C-endopeptidase enhancer 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:323 → 446
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10789558..10795432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538456.1 → XP_038394384.1  procollagen C-endopeptidase enhancer 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YXT5, A0A8I3MFU6
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:348 → 471
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

  2. XM_854308.5 → XP_859401.1  procollagen C-endopeptidase enhancer 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
    Conserved Domains (2) summary
    cd00041
    Location:37 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:323 → 446
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...
Nucleotide Protein
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