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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_023259.1 RefSeqGene
- Range
-
4989..181679
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_002518.4 → NP_002509.2 neuronal PAS domain-containing protein 2
See identical proteins and their annotated locations for NP_002509.2
Status: REVIEWED
- Source sequence(s)
-
AC016738, AC092168, AK095806, AK128586, BC072383, BM724652, U77970
- Consensus CDS
-
CCDS2048.1
- UniProtKB/Swiss-Prot
-
Q99743
- UniProtKB/TrEMBL
-
A2I2P5
- Related
- ENSP00000338283.5, ENST00000335681.10
- Conserved Domains (5) summary
-
- smart00091
Location:84 → 149
- PAS; PAS domain
- cd00083
Location:7 → 61
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:250 → 350
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam13426
Location:94 → 195
- PAS_9; PAS domain
- pfam14598
Location:249 → 352
- PAS_11; PAS domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p13 Primary Assembly
- Range
-
100820139..100996829
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011511242.2 → XP_011509544.1 neuronal PAS domain-containing protein 2 isoform X5
- Conserved Domains (3) summary
-
- cd00083
Location:7 → 61
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:220 → 320
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam14598
Location:219 → 322
- PAS_11; PAS domain
-
XM_005263953.2 → XP_005264010.1 neuronal PAS domain-containing protein 2 isoform X1
- Conserved Domains (5) summary
-
- smart00091
Location:149 → 214
- PAS; PAS domain
- cd00083
Location:72 → 126
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:315 → 415
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam13426
Location:159 → 260
- PAS_9; PAS domain
- pfam14598
Location:314 → 417
- PAS_11; PAS domain
-
XM_017004214.1 → XP_016859703.1 neuronal PAS domain-containing protein 2 isoform X2
-
XM_005263960.2 → XP_005264017.1 neuronal PAS domain-containing protein 2 isoform X7
- Conserved Domains (3) summary
-
- cd00083
Location:72 → 126
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:158 → 312
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam13426
Location:159 → 260
- PAS_9; PAS domain
-
XM_005263959.2 → XP_005264016.1 neuronal PAS domain-containing protein 2 isoform X4
- Conserved Domains (6) summary
-
- smart00091
Location:149 → 214
- PAS; PAS domain
- cd00083
Location:72 → 126
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:315 → 415
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam06752
Location:590 → 719
- E_Pc_C; Enhancer of Polycomb C-terminus
- pfam13426
Location:159 → 260
- PAS_9; PAS domain
- pfam14598
Location:314 → 417
- PAS_11; PAS domain
-
XM_017004216.1 → XP_016859705.1 neuronal PAS domain-containing protein 2 isoform X6
-
XM_017004217.1 → XP_016859706.1 neuronal PAS domain-containing protein 2 isoform X8
-
XM_017004215.1 → XP_016859704.1 neuronal PAS domain-containing protein 2 isoform X3
-
XM_011511243.2 → XP_011509545.1 neuronal PAS domain-containing protein 2 isoform X10
- Conserved Domains (5) summary
-
- smart00091
Location:149 → 214
- PAS; PAS domain
- cd00083
Location:72 → 126
- HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
- cd00130
Location:315 → 415
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam13426
Location:159 → 260
- PAS_9; PAS domain
- pfam14598
Location:314 → 417
- PAS_11; PAS domain
-
XM_005263961.4 → XP_005264018.1 neuronal PAS domain-containing protein 2 isoform X9
- Conserved Domains (2) summary
-
- cd00130
Location:126 → 226
- PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
- pfam14598
Location:125 → 228
- PAS_11; PAS domain