1D06,2I9V,1Y28,1S66,3GEC


Conserved Protein Domain Family
PAS

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smart00091: PAS 
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PAS domain
PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels.
Statistics
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PSSM-Id: 214512
View PSSM: smart00091
Aligned: 195 rows
Threshold Bit Score: 28.519
Threshold Setting Gi: 16329397
Created: 13-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
1D06_A        17 HLRSILDT--VPDATVVSATDGTIVSFNAAAVRQFG---YAEEEVIGQNLRILMPEPYRHEHDGYLQR 79
gi 25150916  206 VLSTVTIP--SNSFVIITSIDLHITFADEKAHQLLNnpfYPDSNIKGMSLYSLIDISDSEVISKMHFD 271
gi 41019223  365 VPDEILSQk-SPKFAIRHTATGIISHVDSAAVSALG---YLPQDLIGRSIMDFYHHEDLSVMKETYET 428
gi 1695921   328 TDMNSISV--PVEFISRHNCQGLFTFVDHRCMATVG---YQPQELLGKNILELAHPEDQELLRDSFQQ 390
gi 25150717  294 AEGMSTGN--THVFSTQHYLDMKFKEADTMASQHLG---FSKEQLKGMSWYGMIHPNHVPEIAHKHRL 356
gi 332211815 327 VNGEIRVK--SMEYVSRHAIDGKFVFVDQRATAILA---YLPQELLGTSCYEYFHQDDIGHLAECHRQ 389
gi 11467953  377 AYKHAGETcaSPKFVTRHLATCKLNYVDPECMPYLG---YLPHEMLGNSVLDFYHPEDLPFLKEVYQI 441
gi 6093690   122 IPSEVVSK--AVPFVMRHAANGNLEYIDPESVPYLG---YLPQDVTDKDALQLYHPEDLDYLQQVYET 184
gi 3914160   239 KEMCVADEp-LEEFTSRHSLEWKFLFLDHRAPPIIG---YLPFEVLGTSGYNYYHIDDLELLARCHQH 302
3GEC_A       152 kvpdeilsqkSPKFAIRHTATGIISHVDSAAVSALG---YLPQDLIGRSIMDFYHHEDLSVMKETYET 216
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