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NR3C1 nuclear receptor subfamily 3 group C member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471681, updated on 2-Nov-2023

Summary

Official Symbol
NR3C1provided by VGNC
Official Full Name
nuclear receptor subfamily 3 group C member 1provided by VGNC
Primary source
VGNC:VGNC:4104
Locus tag
CK820_G0009966
See related
Ensembl:ENSPTRG00000017363
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See NR3C1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (141012277..141137357, complement)

Chromosome 5 - NC_072403.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104006587 Neighboring gene Rho GTPase activating protein 26 Neighboring gene uncharacterized LOC129144109 Neighboring gene uncharacterized LOC107974891 Neighboring gene 60S ribosomal protein L7-like 1 Neighboring gene uncharacterized LOC129144111 Neighboring gene uncharacterized LOC112209326

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072403.1 Chromosome 5 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables nuclear glucocorticoid receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glucocorticoid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in glucocorticoid receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glucocorticoid receptor
Names
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072403.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    141012277..141137357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054685257.1XP_054541232.1  glucocorticoid receptor isoform X2

    UniProtKB/TrEMBL
    A0A2J8NJ02, A0A803KHK7, K7DF61, K7DQB4
  2. XM_009449876.4XP_009448151.2  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A2J8NIZ7, H2QRP6
    Conserved Domains (3) summary
    cd07076
    Location:532778
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:417495
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:26401
    GCR; Glucocorticoid receptor
  3. XM_009449877.4XP_009448152.2  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A2J8NIZ7, H2QRP6
    Conserved Domains (3) summary
    cd07076
    Location:532778
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:417495
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:26401
    GCR; Glucocorticoid receptor