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IL17A interleukin 17A [ Sus scrofa (pig) ]

Gene ID: 449530, updated on 5-Mar-2024

Summary

Gene symbol
IL17A
Gene description
interleukin 17A
See related
Ensembl:ENSSSCG00000001748
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
IL17
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 7 NC_010449.5 (46013584..46017161)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 7 NC_010449.4 (52463736..52467313)

Chromosome 7 - NC_010449.5Genomic Context describing neighboring genes Neighboring gene microRNA mir-206 Neighboring gene microRNA mir-133b Neighboring gene interleukin 17F Neighboring gene minichromosome maintenance complex component 3

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
interleukin-17A
Names
IL-17
IL-17A
interleukin-17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001005729.1NP_001005729.1  interleukin-17A precursor

    See identical proteins and their annotated locations for NP_001005729.1

    Status: PROVISIONAL

    Source sequence(s)
    AB102693
    UniProtKB/Swiss-Prot
    Q60I29
    UniProtKB/TrEMBL
    V5TGG3
    Related
    ENSSSCP00000001905.1, ENSSSCT00000001954.3
    Conserved Domains (1) summary
    pfam06083
    Location:67145
    IL17; Interleukin-17

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010449.5 Reference Sscrofa11.1 Primary Assembly

    Range
    46013584..46017161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)