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AFDN afadin, adherens junction formation factor [ Homo sapiens (human) ]

Gene ID: 4301, updated on 7-Jan-2024

Summary

Official Symbol
AFDNprovided by HGNC
Official Full Name
afadin, adherens junction formation factorprovided by HGNC
Primary source
HGNC:HGNC:7137
See related
Ensembl:ENSG00000130396 MIM:159559; AllianceGenome:HGNC:7137
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AF6; MLLT4; MLL-AF6; l-afadin
Summary
This gene encodes a multi-domain protein involved in signaling and organization of cell junctions during embryogenesis. It has also been identified as the fusion partner of acute lymphoblastic leukemia (ALL-1) gene, involved in acute myeloid leukemias with t(6;11)(q27;q23) translocation. Alternatively spliced transcript variants encoding different isoforms have been described for this gene, however, not all have been fully characterized.[provided by RefSeq, May 2011]
Expression
Ubiquitous expression in esophagus (RPKM 18.5), lung (RPKM 15.9) and 24 other tissues See more
Orthologs
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Genomic context

See AFDN in Genome Data Viewer
Location:
6q27
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (167826564..167972023)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (169164770..169309528)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (168227244..168372703)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase long chain base subunit 2 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168167604-168168104 Neighboring gene long intergenic non-protein coding RNA 1558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168199638-168200171 Neighboring gene uncharacterized LOC441179 Neighboring gene Sharpr-MPRA regulatory region 935 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17792 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25460 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25461 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17793 Neighboring gene AFDN divergent transcript Neighboring gene Sharpr-MPRA regulatory region 4710 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:168264804-168266003 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:168294093-168294968 Neighboring gene uncharacterized LOC107986673 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:168375775-168376684 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168378524-168379100 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:168379101-168379677 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:168380255-168380830 Neighboring gene MPRA-validated peak6321 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168390864-168391364 Neighboring gene uncharacterized LOC100128124 Neighboring gene KIF25 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
EBI GWAS Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Pr55(Gag) gag Cellular biotinylated myeloid/lymphoid or mixed-lineage leukemia; translocated to, 4 (MLLT4, Afadin) protein is incorporated into HIV-1 Gag virus-like particles PubMed
Tat tat The expression of MLLT4 gene is upregulated in both Jurkat-Tat101 and Jurkat-Tat72 cells PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ34371

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables actin filament binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cadherin binding HDA PubMed 
enables cell adhesion molecule binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables small GTPase binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in adherens junction IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cell junction IDA
Inferred from Direct Assay
more info
 
located_in cell-cell contact zone IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell-cell junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in nuclear speck IDA
Inferred from Direct Assay
more info
 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 
part_of pore complex IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in tight junction IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
afadin
Names
ALL1-fused gene from chromosome 6 protein
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
myeloid/lymphoid or mixed-lineage leukemia; translocated to, 4
protein AF-6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029689.2 RefSeqGene

    Range
    4921..150033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001040000.3NP_001035089.1  afadin isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) has several differences compared to variant 4. The resulting isoform (2) is longer at the N-terminus but has a shorter and distinct C-terminus compared to isoform 4.
    Source sequence(s)
    AB209420, AI271860, AK055689, AL009178, BE503462, D60168
    Consensus CDS
    CCDS47517.1
    UniProtKB/TrEMBL
    Q5TIG5
    Related
    ENSP00000375956.3, ENST00000392108.7
    Conserved Domains (5) summary
    cd01781
    Location:247346
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20131
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:417499
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:611932
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10081090
    PDZ; PDZ domain (Also known as DHR or GLGF)
  2. NM_001207008.2NP_001193937.1  afadin isoform 1

    See identical proteins and their annotated locations for NP_001193937.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) has multiple differences compared to variant 4. The resulting isoform (1, also known as AF6i3) contains a C-terminal F-actin-binding site and has been shown to be involved in the regulation of epithelial wound closure and intercellular adhesion (PMID:16882694).
    Source sequence(s)
    AB209420, AL009178, AL049698, AL161973, BE645141, DA200453, DB079271
    Consensus CDS
    CCDS75553.1
    UniProtKB/TrEMBL
    G1UI22
    Related
    ENSP00000375960.2, ENST00000392112.5
    Conserved Domains (5) summary
    cd01781
    Location:246345
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20131
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:383483
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd00992
    Location:9911073
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd15471
    Location:595916
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
  3. NM_001291964.2NP_001278893.1  afadin isoform 4

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) represents the longest transcript and encodes the longest isoform (4).
    Source sequence(s)
    AB621809, AL009178, AL049698, AL161973
    Consensus CDS
    CCDS78199.1
    UniProtKB/TrEMBL
    A8MQ02, G1UI22
    Related
    ENSP00000355771.3, ENST00000366806.6
    Conserved Domains (5) summary
    cd01781
    Location:206305
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd00060
    Location:376458
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:570891
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:9671049
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl00155
    Location:190
    UBQ; Ubiquitin-like proteins
  4. NM_001366319.2NP_001353248.1  afadin isoform 5

    Status: REVIEWED

    Source sequence(s)
    AL009178, AL049698, KT258903
    UniProtKB/TrEMBL
    A0A1P7ZIN0, G1UI22
    Conserved Domains (6) summary
    cd01781
    Location:247346
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20131
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:417499
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:611932
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10081090
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl25548
    Location:15171678
    DUF4670; Domain of unknown function (DUF4670)
  5. NM_001366320.2NP_001353249.1  afadin isoform 6

    Status: REVIEWED

    Source sequence(s)
    AL009178, AL049698, AL731868
    Consensus CDS
    CCDS94034.1
    UniProtKB/Swiss-Prot
    O75087, O75088, O75089, P55196, Q59FP0, Q5TIG6, Q5TIG7, Q9NSN7, Q9NU92
    UniProtKB/TrEMBL
    G1UI22
    Related
    ENSP00000404595.2, ENST00000447894.6
    Conserved Domains (6) summary
    cd01781
    Location:247346
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20131
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:417499
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:611932
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10081090
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl25548
    Location:15171680
    DUF4670; Domain of unknown function (DUF4670)
  6. NM_001366321.2NP_001353250.1  afadin isoform 7

    Status: REVIEWED

    Source sequence(s)
    AL009178, AL049698, AL731868
    UniProtKB/TrEMBL
    G1UI22
    Conserved Domains (6) summary
    cd01781
    Location:248347
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20132
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:385485
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:597925
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10011083
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl25548
    Location:15101673
    DUF4670; Domain of unknown function (DUF4670)
  7. NM_001386888.1NP_001373817.1  afadin isoform 8

    Status: REVIEWED

    Source sequence(s)
    AL009178, AL049698, AL731868
    Consensus CDS
    CCDS94033.1
    UniProtKB/TrEMBL
    A0A804HJ20, G1UI22
    Related
    ENSP00000507324.1, ENST00000683244.1
    Conserved Domains (6) summary
    cd00060
    Location:417499
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:611939
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    cd01781
    Location:247347
    RA2_Afadin; Ras-associating (RA) domain 2 found in Afadin
    cd01782
    Location:20131
    RA1_Afadin; Ras-associating (RA) domain 1 found in Afadin
    pfam00595
    Location:10151097
    PDZ; PDZ domain (Also known as DHR or GLGF)
    pfam15709
    Location:14691687
    DUF4670; Domain of unknown function (DUF4670)
  8. NM_001410951.1NP_001397880.1  afadin isoform 9

    Status: REVIEWED

    Source sequence(s)
    AL009178, AL049698, AL731868
    Consensus CDS
    CCDS94035.1
    UniProtKB/TrEMBL
    G1UI22, J3KN01
    Related
    ENSP00000252692.6, ENST00000351017.9

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    167826564..167972023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047418788.1XP_047274744.1  afadin isoform X1

    UniProtKB/TrEMBL
    H0Y8U8
  2. XM_047418789.1XP_047274745.1  afadin isoform X2

    UniProtKB/TrEMBL
    H0Y8U8
  3. XM_017010878.2XP_016866367.1  afadin isoform X27

    UniProtKB/TrEMBL
    G1UI22
  4. XM_006715491.3XP_006715554.1  afadin isoform X45

    UniProtKB/TrEMBL
    G1UI22
    Conserved Domains (5) summary
    cd01781
    Location:248347
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20132
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:418500
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:612940
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10161098
    PDZ; PDZ domain (Also known as DHR or GLGF)
  5. XM_047418790.1XP_047274746.1  afadin isoform X3

    UniProtKB/TrEMBL
    H0Y8U8
  6. XM_047418791.1XP_047274747.1  afadin isoform X4

    UniProtKB/TrEMBL
    H0Y8U8
  7. XM_047418814.1XP_047274770.1  afadin isoform X28

    UniProtKB/TrEMBL
    G1UI22
  8. XM_047418792.1XP_047274748.1  afadin isoform X5

    UniProtKB/TrEMBL
    H0Y8U8
  9. XM_047418793.1XP_047274749.1  afadin isoform X6

    UniProtKB/TrEMBL
    H0Y8U8
  10. XM_017010882.2XP_016866371.1  afadin isoform X29

    UniProtKB/TrEMBL
    G1UI22
  11. XM_047418794.1XP_047274750.1  afadin isoform X7

    UniProtKB/TrEMBL
    H0Y8U8
  12. XM_005266997.3XP_005267054.1  afadin isoform X31

    UniProtKB/TrEMBL
    G1UI22
    Conserved Domains (5) summary
    cd01781
    Location:248347
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20132
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:418500
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:612933
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:10091091
    PDZ; PDZ domain (Also known as DHR or GLGF)
  13. XM_047418796.1XP_047274752.1  afadin isoform X9

    UniProtKB/TrEMBL
    H0Y8U8
  14. XM_047418798.1XP_047274754.1  afadin isoform X11

    UniProtKB/TrEMBL
    H0Y8U8
  15. XM_047418800.1XP_047274756.1  afadin isoform X13

    UniProtKB/TrEMBL
    H0Y8U8
  16. XM_047418818.1XP_047274774.1  afadin isoform X34

    UniProtKB/TrEMBL
    G1UI22
  17. XM_047418801.1XP_047274757.1  afadin isoform X14

    UniProtKB/TrEMBL
    H0Y8U8
  18. XM_047418804.1XP_047274760.1  afadin isoform X17

    UniProtKB/TrEMBL
    H0Y8U8
  19. XM_047418821.1XP_047274777.1  afadin isoform X37

    UniProtKB/TrEMBL
    G1UI22
  20. XM_047418805.1XP_047274761.1  afadin isoform X18

    UniProtKB/TrEMBL
    H0Y8U8
  21. XM_047418811.1XP_047274767.1  afadin isoform X24

    UniProtKB/TrEMBL
    H0Y8U8
  22. XM_047418824.1XP_047274780.1  afadin isoform X41

    UniProtKB/TrEMBL
    G1UI22
  23. XM_047418815.1XP_047274771.1  afadin isoform X30

    UniProtKB/TrEMBL
    G1UI22
  24. XM_047418797.1XP_047274753.1  afadin isoform X10

    UniProtKB/TrEMBL
    H0Y8U8
    Related
    ENSP00000422166.3, ENST00000515794.3
  25. XM_047418816.1XP_047274772.1  afadin isoform X32

    UniProtKB/TrEMBL
    G1UI22
  26. XM_047418820.1XP_047274776.1  afadin isoform X36

    UniProtKB/TrEMBL
    G1UI22
  27. XM_047418802.1XP_047274758.1  afadin isoform X15

    UniProtKB/TrEMBL
    H0Y8U8
  28. XM_047418808.1XP_047274764.1  afadin isoform X21

    UniProtKB/TrEMBL
    H0Y8U8
  29. XM_047418823.1XP_047274779.1  afadin isoform X39

    UniProtKB/TrEMBL
    G1UI22
  30. XM_047418810.1XP_047274766.1  afadin isoform X23

    UniProtKB/TrEMBL
    H0Y8U8
  31. XM_047418813.1XP_047274769.1  afadin isoform X26

    UniProtKB/TrEMBL
    H0Y8U8
  32. XM_047418826.1XP_047274782.1  afadin isoform X43

    UniProtKB/TrEMBL
    G1UI22
  33. XM_047418795.1XP_047274751.1  afadin isoform X8

    UniProtKB/TrEMBL
    H0Y8U8
  34. XM_047418819.1XP_047274775.1  afadin isoform X35

    UniProtKB/TrEMBL
    G1UI22
  35. XM_047418803.1XP_047274759.1  afadin isoform X16

    UniProtKB/TrEMBL
    H0Y8U8
  36. XM_047418807.1XP_047274763.1  afadin isoform X20

    UniProtKB/TrEMBL
    H0Y8U8
  37. XM_047418822.1XP_047274778.1  afadin isoform X38

    UniProtKB/TrEMBL
    G1UI22
  38. XM_047418809.1XP_047274765.1  afadin isoform X22

    UniProtKB/TrEMBL
    H0Y8U8
  39. XM_047418812.1XP_047274768.1  afadin isoform X25

    UniProtKB/TrEMBL
    H0Y8U8
  40. XM_047418825.1XP_047274781.1  afadin isoform X42

    UniProtKB/TrEMBL
    G1UI22
  41. XM_047418799.1XP_047274755.1  afadin isoform X12

    UniProtKB/TrEMBL
    H0Y8U8
  42. XM_047418817.1XP_047274773.1  afadin isoform X33

    UniProtKB/TrEMBL
    G1UI22
  43. XM_047418806.1XP_047274762.1  afadin isoform X19

    UniProtKB/TrEMBL
    H0Y8U8
  44. XM_017010885.2XP_016866374.1  afadin isoform X40

    UniProtKB/TrEMBL
    G1UI22
    Conserved Domains (5) summary
    cd01781
    Location:246345
    AF6_RA_repeat2; Ubiquitin domain of AT-6, second repeat
    cd01782
    Location:20131
    AF6_RA_repeat1; Ubiquitin domain of AT-6, first repeat
    cd00060
    Location:383483
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd15471
    Location:595916
    Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
    pfam00595
    Location:9921074
    PDZ; PDZ domain (Also known as DHR or GLGF)
  45. XM_047418827.1XP_047274783.1  afadin isoform X44

    UniProtKB/TrEMBL
    G1UI22

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    169164770..169309528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054355465.1XP_054211440.1  afadin isoform X1

    UniProtKB/TrEMBL
    H0Y8U8
  2. XM_054355466.1XP_054211441.1  afadin isoform X2

    UniProtKB/TrEMBL
    H0Y8U8
  3. XM_054355491.1XP_054211466.1  afadin isoform X27

    UniProtKB/TrEMBL
    G1UI22
  4. XM_054355509.1XP_054211484.1  afadin isoform X45

    UniProtKB/TrEMBL
    G1UI22
  5. XM_054355467.1XP_054211442.1  afadin isoform X3

    UniProtKB/TrEMBL
    H0Y8U8
  6. XM_054355468.1XP_054211443.1  afadin isoform X4

    UniProtKB/TrEMBL
    H0Y8U8
  7. XM_054355492.1XP_054211467.1  afadin isoform X28

    UniProtKB/TrEMBL
    G1UI22
  8. XM_054355469.1XP_054211444.1  afadin isoform X5

    UniProtKB/TrEMBL
    H0Y8U8
  9. XM_054355470.1XP_054211445.1  afadin isoform X6

    UniProtKB/TrEMBL
    H0Y8U8
  10. XM_054355493.1XP_054211468.1  afadin isoform X29

    UniProtKB/TrEMBL
    G1UI22
  11. XM_054355471.1XP_054211446.1  afadin isoform X7

    UniProtKB/TrEMBL
    H0Y8U8
  12. XM_054355495.1XP_054211470.1  afadin isoform X31

    UniProtKB/TrEMBL
    G1UI22
  13. XM_054355473.1XP_054211448.1  afadin isoform X9

    UniProtKB/TrEMBL
    H0Y8U8
  14. XM_054355475.1XP_054211450.1  afadin isoform X11

    UniProtKB/TrEMBL
    H0Y8U8
  15. XM_054355477.1XP_054211452.1  afadin isoform X13

    UniProtKB/TrEMBL
    H0Y8U8
  16. XM_054355498.1XP_054211473.1  afadin isoform X34

    UniProtKB/TrEMBL
    G1UI22
  17. XM_054355478.1XP_054211453.1  afadin isoform X14

    UniProtKB/TrEMBL
    H0Y8U8
  18. XM_054355481.1XP_054211456.1  afadin isoform X17

    UniProtKB/TrEMBL
    H0Y8U8
  19. XM_054355501.1XP_054211476.1  afadin isoform X37

    UniProtKB/TrEMBL
    G1UI22
  20. XM_054355482.1XP_054211457.1  afadin isoform X18

    UniProtKB/TrEMBL
    H0Y8U8
  21. XM_054355488.1XP_054211463.1  afadin isoform X24

    UniProtKB/TrEMBL
    H0Y8U8
  22. XM_054355505.1XP_054211480.1  afadin isoform X41

    UniProtKB/TrEMBL
    G1UI22
  23. XM_054355494.1XP_054211469.1  afadin isoform X30

    UniProtKB/TrEMBL
    G1UI22
  24. XM_054355474.1XP_054211449.1  afadin isoform X10

    UniProtKB/TrEMBL
    H0Y8U8
  25. XM_054355496.1XP_054211471.1  afadin isoform X32

    UniProtKB/TrEMBL
    G1UI22
  26. XM_054355500.1XP_054211475.1  afadin isoform X36

    UniProtKB/TrEMBL
    G1UI22
  27. XM_054355479.1XP_054211454.1  afadin isoform X15

    UniProtKB/TrEMBL
    H0Y8U8
  28. XM_054355485.1XP_054211460.1  afadin isoform X21

    UniProtKB/TrEMBL
    H0Y8U8
  29. XM_054355503.1XP_054211478.1  afadin isoform X39

    UniProtKB/TrEMBL
    G1UI22
  30. XM_054355487.1XP_054211462.1  afadin isoform X23

    UniProtKB/TrEMBL
    H0Y8U8
  31. XM_054355490.1XP_054211465.1  afadin isoform X26

    UniProtKB/TrEMBL
    H0Y8U8
  32. XM_054355507.1XP_054211482.1  afadin isoform X43

    UniProtKB/TrEMBL
    G1UI22
  33. XM_054355472.1XP_054211447.1  afadin isoform X8

    UniProtKB/TrEMBL
    H0Y8U8
  34. XM_054355499.1XP_054211474.1  afadin isoform X35

    UniProtKB/TrEMBL
    G1UI22
  35. XM_054355480.1XP_054211455.1  afadin isoform X16

    UniProtKB/TrEMBL
    H0Y8U8
  36. XM_054355484.1XP_054211459.1  afadin isoform X20

    UniProtKB/TrEMBL
    H0Y8U8
  37. XM_054355502.1XP_054211477.1  afadin isoform X38

    UniProtKB/TrEMBL
    G1UI22
  38. XM_054355486.1XP_054211461.1  afadin isoform X22

    UniProtKB/TrEMBL
    H0Y8U8
  39. XM_054355489.1XP_054211464.1  afadin isoform X25

    UniProtKB/TrEMBL
    H0Y8U8
  40. XM_054355506.1XP_054211481.1  afadin isoform X42

    UniProtKB/TrEMBL
    G1UI22
  41. XM_054355476.1XP_054211451.1  afadin isoform X12

    UniProtKB/TrEMBL
    H0Y8U8
  42. XM_054355497.1XP_054211472.1  afadin isoform X33

    UniProtKB/TrEMBL
    G1UI22
  43. XM_054355483.1XP_054211458.1  afadin isoform X19

    UniProtKB/TrEMBL
    H0Y8U8
  44. XM_054355504.1XP_054211479.1  afadin isoform X40

    UniProtKB/TrEMBL
    G1UI22
  45. XM_054355508.1XP_054211483.1  afadin isoform X44

    UniProtKB/TrEMBL
    G1UI22

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001040001.1: Suppressed sequence

    Description
    NM_001040001.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
  2. NM_005936.2: Suppressed sequence

    Description
    NM_005936.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.