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ZNF429 zinc finger protein 429 [ Homo sapiens (human) ]

Gene ID: 353088, updated on 13-Mar-2020

Summary

Official Symbol
ZNF429provided by HGNC
Official Full Name
zinc finger protein 429provided by HGNC
Primary source
HGNC:HGNC:20817
See related
Ensembl:ENSG00000197013
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 2.7), ovary (RPKM 1.8) and 25 other tissues See more
Orthologs

Genomic context

See ZNF429 in Genome Data Viewer
Location:
19p12
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (21505427..21541157)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (21688437..21721079)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372321 Neighboring gene long intergenic non-protein coding RNA 664 Neighboring gene BCL2 interacting protein 3 pseudogene 26 Neighboring gene WAS/WASL-interacting protein family member 1 Neighboring gene uncharacterized LOC105372323 Neighboring gene zinc finger protein 100-like

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001415.4NP_001001415.2  zinc finger protein 429 isoform a

    See identical proteins and their annotated locations for NP_001001415.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (a).
    Source sequence(s)
    AC010615, BM981242, DA533537
    Consensus CDS
    CCDS42537.1
    UniProtKB/Swiss-Prot
    Q86V71
    Related
    ENSP00000351280.3, ENST00000358491.9
    Conserved Domains (5) summary
    smart00349
    Location:463
    KRAB; krueppel associated box
    COG5048
    Location:229624
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:427447
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:443
    KRAB; KRAB box
    pfam13465
    Location:467492
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001346912.2NP_001333841.1  zinc finger protein 429 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC010615
  3. NM_001346913.2NP_001333842.1  zinc finger protein 429 isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3), as well as variants 4 and 5, encodes isoform c.
    Source sequence(s)
    AC010615
  4. NM_001346914.2NP_001333843.1  zinc finger protein 429 isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4), as well as variants 3 and 5, encodes isoform c.
    Source sequence(s)
    AC010615
  5. NM_001346915.2NP_001333844.1  zinc finger protein 429 isoform c

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5), as well as variants 3 and 4, encodes isoform c.
    Source sequence(s)
    AC010615
  6. NM_001346916.2NP_001333845.1  zinc finger protein 429 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC010615

RNA

  1. NR_144522.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010615, KC877715
  2. NR_144523.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010615, KC877715
  3. NR_144524.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010615, KC877715
  4. NR_144525.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010615
    Related
    ENST00000598747.1
  5. NR_144526.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010615
    Related
    ENST00000597556.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    21505427..21541157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017026748.2XP_016882237.1  zinc finger protein 429 isoform X1

  2. XM_017026750.2XP_016882239.1  zinc finger protein 429 isoform X2

  3. XM_017026753.2XP_016882242.1  zinc finger protein 429 isoform X2

  4. XM_017026749.1XP_016882238.1  zinc finger protein 429 isoform X1

  5. XM_017026755.1XP_016882244.1  zinc finger protein 429 isoform X2

  6. XM_017026752.1XP_016882241.1  zinc finger protein 429 isoform X2

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