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MIR23AHG miR-23a/27a/24-2 cluster host gene [ Homo sapiens (human) ]

Gene ID: 284454, updated on 10-Oct-2023

Summary

Official Symbol
MIR23AHGprovided by HGNC
Official Full Name
miR-23a/27a/24-2 cluster host geneprovided by HGNC
Primary source
HGNC:HGNC:27620
See related
AllianceGenome:HGNC:27620
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Smyca
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Genomic context

See MIR23AHG in Genome Data Viewer
Location:
19p13.12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (13834516..13842918, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (13960647..13969051, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (13945330..13953732, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14135 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:13885277-13885806 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:13885807-13886335 Neighboring gene chromosome 19 open reading frame 53 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:13896673-13897634 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14136 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14137 Neighboring gene zinc finger SWIM-type containing 4 Neighboring gene uncharacterized LOC107985334 Neighboring gene MPRA-validated peak3376 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:13928069-13928736 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:13928737-13929405 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:13929406-13930073 Neighboring gene RNA, 7SL, cytoplasmic 619, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:13936598-13937294 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14139 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14140 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14142 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14141 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14143 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10212 Neighboring gene CRISPRi-validated cis-regulatory element chr19.2258 Neighboring gene microRNA 24-2 Neighboring gene microRNA 23a Neighboring gene microRNA 27a Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14144 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:13958655-13958860 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:13964511-13965456 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14145 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:13975386-13976271 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10216 Neighboring gene nanos C2HC-type zinc finger 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10217 Neighboring gene microRNA 181c Neighboring gene microRNA 181d

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • CTD-3252C9.4
  • Smad/Myc coactivator

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036515.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020916

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    13834516..13842918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160022.1 Reference GRCh38.p14 PATCHES

    Range
    46357..54759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    13960647..13969051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)