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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047030.1 RefSeqGene
- Range
-
5050..25130
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001025091.2 → NP_001020262.1 ATP-binding cassette sub-family F member 1 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AF027302, BC034488, BI547952, BM556481, BU620927
- Consensus CDS
-
CCDS34380.1
- UniProtKB/Swiss-Prot
- A2BF75, O14897, Q69YP6, Q8NE71
- UniProtKB/TrEMBL
- A0A1U9X609, Q5STZ8
- Related
- ENSP00000313603.8, ENST00000326195.13
- Conserved Domains (1) summary
-
- COG0488
Location:302 → 833
- Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
-
NM_001090.3 → NP_001081.1 ATP-binding cassette sub-family F member 1 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1. The resulting protein (isoform b) is shorter than isoform a.
- Source sequence(s)
-
AF027302, BM556481, BU620927
- Consensus CDS
-
CCDS34381.1
- UniProtKB/TrEMBL
- Q2L6I2, Q5STZ8
- Related
- ENSP00000365728.3, ENST00000376545.7
- Conserved Domains (3) summary
-
- cd03221
Location:266 → 487
- ABCF_EF-3; ATP-binding cassette domain of elongation factor 3, subfamily F
- COG0488
Location:264 → 795
- Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
- cl21455
Location:659 → 736
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
30571442..30591522
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
2051164..2071240
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_3
Genomic
-
NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3
- Range
-
1827269..1847349
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_4
Genomic
-
NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4
- Range
-
1881671..1901751
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_5
Genomic
-
NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5
- Range
-
1915488..1935568
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_6
Genomic
-
NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6
- Range
-
1826529..1846605
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_7
Genomic
-
NT_167249.2 Reference GRCh38.p14 ALT_REF_LOCI_7
- Range
-
1872199..1892278
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
30435621..30455699
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)