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Zfp322a zinc finger protein 322A [ Mus musculus (house mouse) ]

Gene ID: 218100, updated on 23-Jun-2021

Summary

Official Symbol
Zfp322aprovided by MGI
Official Full Name
zinc finger protein 322Aprovided by MGI
Primary source
MGI:MGI:2442566
See related
Ensembl:ENSMUSG00000046351
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Znf322; Znf322a
Expression
Broad expression in CNS E11.5 (RPKM 6.1), CNS E14 (RPKM 5.6) and 20 other tissues See more
Orthologs
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Genomic context

See Zfp322a in Genome Data Viewer
Location:
13; 13 A3.1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (23537273..23553378, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (23353103..23369208, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (23444973..23461071, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930557F10 gene Neighboring gene RIKEN cDNA 4930586N03 gene Neighboring gene nuclear encoded tRNA isoleucine 9 (anticodon AAT) Neighboring gene nuclear encoded tRNA methionine 12 (anticodon CAT) Neighboring gene 60S ribosomal protein L39 pseudogene Neighboring gene nuclear encoded tRNA isoleucine 3 (anticodon AAT)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Clone Names

  • RP23-9O13.9, 9630054P07Rik

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111107.2NP_001104577.1  zinc finger protein 322

    See identical proteins and their annotated locations for NP_001104577.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR, compared to variant 3. Variants 1-4 encode the same protein.
    Source sequence(s)
    AK036302, AL669819, CF743666
    Consensus CDS
    CCDS26337.1
    UniProtKB/Swiss-Prot
    Q8BZ89
    Conserved Domains (3) summary
    COG5048
    Location:79229
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:139159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:179203
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001286155.1NP_001273084.1  zinc finger protein 322

    See identical proteins and their annotated locations for NP_001273084.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) represents the longest transcript. Variants 1-4 encode the same protein.
    Source sequence(s)
    AK036302, AL669819, CF743666
    Consensus CDS
    CCDS26337.1
    UniProtKB/Swiss-Prot
    Q8BZ89
    Conserved Domains (3) summary
    COG5048
    Location:79229
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:139159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:179203
    zf-H2C2_2; Zinc-finger double domain
  3. NM_001286156.1NP_001273085.1  zinc finger protein 322

    See identical proteins and their annotated locations for NP_001273085.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR, compared to variant 3. Variants 1-4 encode the same protein.
    Source sequence(s)
    AK036302, AL669819, CF743666
    Consensus CDS
    CCDS26337.1
    UniProtKB/Swiss-Prot
    Q8BZ89
    Conserved Domains (3) summary
    COG5048
    Location:79229
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:139159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:179203
    zf-H2C2_2; Zinc-finger double domain
  4. NM_172586.4NP_766174.1  zinc finger protein 322

    See identical proteins and their annotated locations for NP_766174.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 3. Variants 1-4 encode the same protein.
    Source sequence(s)
    AK036302, AL669819
    Consensus CDS
    CCDS26337.1
    UniProtKB/Swiss-Prot
    Q8BZ89
    Related
    ENSMUSP00000061524.3, ENSMUST00000050101.9
    Conserved Domains (3) summary
    COG5048
    Location:79229
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:139159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:179203
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    23537273..23553378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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