U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zbtb21 zinc finger and BTB domain containing 21 [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121302704, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
zbtb21
Gene description
zinc finger and BTB domain containing 21
See related
EnsemblRapid:ENSPAHG00005013497
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See zbtb21 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 30 NC_054563.1 (260272..271355, complement)

Chromosome 30 - NC_054563.1Genomic Context describing neighboring genes Neighboring gene C2 domain-containing protein 2 Neighboring gene autophagy related 101 Neighboring gene uromodulin-like 1 Neighboring gene UV radiation resistance associated gene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_054563.1 Chromosome 30 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 21

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054563.1 Reference ASM1765450v1 Primary Assembly

    Range
    260272..271355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041232794.1 → XP_041088728.1  zinc finger and BTB domain-containing protein 21

    Related
    ENSPAHP00005019222.1, ENSPAHT00005020459.1
    Conserved Domains (4) summary
    sd00017
    Location:872 → 892
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:613 → 633
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:676 → 698
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl38908
    Location:12 → 123
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

  2. XM_041232793.1 → XP_041088727.1  zinc finger and BTB domain-containing protein 21

    Related
    ENSPAHP00005019214.1, ENSPAHT00005020451.1
    Conserved Domains (4) summary
    sd00017
    Location:872 → 892
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:613 → 633
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:676 → 698
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl38908
    Location:12 → 123
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.