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LOC111982777 MDS1 and EVI1 complex locus protein EVI1 [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111982777, updated on 11-Jan-2024

Summary

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Gene symbol
LOC111982777
Gene description
MDS1 and EVI1 complex locus protein EVI1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC111982777 in Genome Data Viewer
Location:
chromosome: LG22
Exon count:
10
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG22 NC_036862.1 (15087551..15115755, complement)

Linkage Group LG22 - NC_036862.1Genomic Context describing neighboring genes Neighboring gene multiple epidermal growth factor-like domains protein 6 Neighboring gene MDS1 and EVI1 complex locus protein EVI1-like Neighboring gene alpha-2-macroglobulin-like Neighboring gene alpha-2-macroglobulin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036862.1 Chromosome LG22 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MDS1 and EVI1 complex locus protein EVI1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036862.1 Reference ASM291031v2 Primary Assembly

    Range
    15087551..15115755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024014367.1 → XP_023870135.1  MDS1 and EVI1 complex locus protein EVI1

    Conserved Domains (5) summary
    PHA00733
    Location:691 → 809
    PHA00733; hypothetical protein
    COG5048
    Location:68 → 219
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:759 → 779
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:757 → 779
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:771 → 795
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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