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ZNF280D zinc finger protein 280D [ Phascolarctos cinereus (koala) ]

Gene ID: 110205165, updated on 15-Mar-2024

Summary

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Gene symbol
ZNF280D
Gene description
zinc finger protein 280D
See related
Ensembl:ENSPCIG00000018502
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See ZNF280D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343952.1 (26049760..26131787, complement)

NW_018343952.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA-associated Sm-like protein LSm3 pseudogene Neighboring gene testis expressed 9 Neighboring gene meiosis specific nuclear structural 1 Neighboring gene proline-rich antigen-like Neighboring gene uncharacterized LOC110205212 Neighboring gene transcription factor 12 Neighboring gene uncharacterized LOC110205244

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343952 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 280D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343952.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    26049760..26131787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020981504.1 → XP_020837163.1  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A6P5JUR8
    Related
    ENSPCIP00000024558.2, ENSPCIT00000030258.2
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  2. XM_020981524.1 → XP_020837183.1  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A6P5JUR8
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  3. XM_020981534.1 → XP_020837193.1  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A6P5JUR8
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  4. XM_020981542.1 → XP_020837201.1  zinc finger protein 280D isoform X2

    UniProtKB/TrEMBL
    A0A6P5JXF4
    Conserved Domains (2) summary
    sd00017
    Location:341 → 362
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 211
    DUF4195; Domain of unknown function (DUF4195)

  5. XM_020981550.1 → XP_020837209.1  zinc finger protein 280D isoform X3

    UniProtKB/TrEMBL
    A0A6P5JYB6
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  6. XM_020981497.1 → XP_020837156.1  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A6P5JUR8
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  7. XM_020981512.1 → XP_020837171.1  zinc finger protein 280D isoform X1

    UniProtKB/TrEMBL
    A0A6P5JUR8
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  8. XM_020981569.1 → XP_020837228.1  zinc finger protein 280D isoform X5

    UniProtKB/TrEMBL
    A0A6P5JUT8
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  9. XM_020981556.1 → XP_020837215.1  zinc finger protein 280D isoform X4

    UniProtKB/TrEMBL
    A0A6P5JSZ3
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

  10. XM_020981579.1 → XP_020837238.1  zinc finger protein 280D isoform X6

    UniProtKB/TrEMBL
    A0A6P5JUU5
    Conserved Domains (2) summary
    sd00017
    Location:357 → 378
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13836
    Location:50 → 227
    DUF4195; Domain of unknown function (DUF4195)

RNA

  1. XR_002323522.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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