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IKZF2 IKAROS family zinc finger 2 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106974145, updated on 13-Mar-2024

Summary

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Gene symbol
IKZF2
Gene description
IKAROS family zinc finger 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: C1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) C1 NC_069381.1 (194552727..194717621, complement)

Chromosome C1 - NC_069381.1Genomic Context describing neighboring genes Neighboring gene erb-b2 receptor tyrosine kinase 4 Neighboring gene 60S ribosomal protein L36-like Neighboring gene uncharacterized LOC113596822 Neighboring gene securin-like Neighboring gene sperm associated antigen 16 Neighboring gene dnaJ homolog subfamily A member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069381.1 Chromosome C1 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein Helios

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069381.1 Reference VMU_Ajub_asm_v1.0

    Range
    194552727..194717621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027051621.2 → XP_026907422.1  zinc finger protein Helios isoform X4

    UniProtKB/TrEMBL
    A0A6J1YQI4
    Conserved Domains (2) summary
    sd00017
    Location:114 → 134
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:154 → 179
    zf-H2C2_2; Zinc-finger double domain

  2. XM_027051601.2 → XP_026907402.1  zinc finger protein Helios isoform X3

    UniProtKB/TrEMBL
    A0A6J1YRT0
    Conserved Domains (2) summary
    sd00017
    Location:115 → 135
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:155 → 180
    zf-H2C2_2; Zinc-finger double domain

  3. XM_027051584.2 → XP_026907385.1  zinc finger protein Helios isoform X3

    UniProtKB/TrEMBL
    A0A6J1YRT0
    Conserved Domains (2) summary
    sd00017
    Location:115 → 135
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:155 → 180
    zf-H2C2_2; Zinc-finger double domain

  4. XM_027051556.2 → XP_026907357.1  zinc finger protein Helios isoform X1

    UniProtKB/TrEMBL
    A0A6J1YQC2
    Conserved Domains (2) summary
    sd00017
    Location:121 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:161 → 186
    zf-H2C2_2; Zinc-finger double domain

  5. XM_027051594.2 → XP_026907395.1  zinc finger protein Helios isoform X3

    UniProtKB/TrEMBL
    A0A6J1YRT0
    Conserved Domains (2) summary
    sd00017
    Location:115 → 135
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:155 → 180
    zf-H2C2_2; Zinc-finger double domain

  6. XM_027051577.2 → XP_026907378.1  zinc finger protein Helios isoform X3

    UniProtKB/TrEMBL
    A0A6J1YRT0
    Conserved Domains (2) summary
    sd00017
    Location:115 → 135
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:155 → 180
    zf-H2C2_2; Zinc-finger double domain

  7. XM_027051614.2 → XP_026907415.1  zinc finger protein Helios isoform X4

    UniProtKB/TrEMBL
    A0A6J1YQI4
    Conserved Domains (2) summary
    sd00017
    Location:114 → 134
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:154 → 179
    zf-H2C2_2; Zinc-finger double domain

  8. XM_027051607.2 → XP_026907408.1  zinc finger protein Helios isoform X4

    UniProtKB/TrEMBL
    A0A6J1YQI4
    Conserved Domains (2) summary
    sd00017
    Location:114 → 134
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:154 → 179
    zf-H2C2_2; Zinc-finger double domain

  9. XM_053215754.1 → XP_053071729.1  zinc finger protein Helios isoform X3

    UniProtKB/TrEMBL
    A0A6J1YRT0

  10. XM_027051624.2 → XP_026907425.1  zinc finger protein Helios isoform X5

    UniProtKB/TrEMBL
    A0A6J1YTN4
    Conserved Domains (3) summary
    COG5048
    Location:114 → 188
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:123 → 143
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:135 → 160
    zf-H2C2_2; Zinc-finger double domain

  11. XM_027051630.2 → XP_026907431.1  zinc finger protein Helios isoform X6

    UniProtKB/TrEMBL
    A0A6J1YQJ0
    Conserved Domains (3) summary
    COG5048
    Location:113 → 187
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:122 → 142
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:134 → 159
    zf-H2C2_2; Zinc-finger double domain

  12. XM_053215753.1 → XP_053071728.1  zinc finger protein Helios isoform X2

    UniProtKB/TrEMBL
    A0A6J1YTH8

  13. XM_027051637.2 → XP_026907438.1  zinc finger protein Helios isoform X7

    UniProtKB/TrEMBL
    A0A6J1YRY6
    Conserved Domains (2) summary
    sd00017
    Location:90 → 110
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:130 → 155
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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