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PTGS2 prostaglandin-endoperoxide synthase 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106736995, updated on 8-May-2024

Summary

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Gene symbol
PTGS2
Gene description
prostaglandin-endoperoxide synthase 2
Locus tag
Y1Q_0004260
See related
EnsemblRapid:ENSAMIG00015009763
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (56562111..56572234, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713513.1 (5114622..5124767)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene odr-4 GPCR localization factor homolog Neighboring gene phosducin Neighboring gene phospholipase A2 group IVA Neighboring gene uncharacterized LOC132250626

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cyclooxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin G/H synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    56562111..56572234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006267574.4 → XP_006267636.1  prostaglandin G/H synthase 2

    UniProtKB/TrEMBL
    A0A151MIJ3
    Related
    ENSAMIP00015012168.1, ENSAMIT00015017687.1
    Conserved Domains (2) summary
    cd09816
    Location:76 → 563
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    pfam00008
    Location:22 → 54
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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