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Taxonomy browser (Alligator mississippiensis)

Alligator mississippiensis

Taxonomy ID: 8496 (for references in articles please use NCBI:txid8496)
Scientific name: Alligator mississippiensis
Genbank common name: American alligator
Inherited blast name: vertebrates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
   Entrez records   
Database name Direct links
Nucleotide 63,105
Nucleotide EST 5,425
Nucleotide GSS 3,276
Protein 74,824
Genome 1
Popset 68
GEO Datasets 26
PubMed Central 676
Gene 30,193
SRA Experiments 170
Protein Clusters 13
Identical Protein Groups 59,937
Bio Project 12
Bio Sample 189
Bio Systems 346
Assembly 5
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for Alligator mississippiensis
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND SHOTGUN ALL
NISC - NIH Intramural Sequencing Center
- 39,291 39,291
TIGR - The Institute for Genome Research
172 - 172
Totals per type
172 39,291 39,463

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alligator mississippiensis taxonomy/phylogenetic Animal Diversity Web
Alligator mississippiensis taxonomy taxonomy/phylogenetic Arctos Specimen Database
Alligator mississippiensis taxonomy/phylogenetic CalPhotos
2 records from this provider supplemental materials Dryad Digital Repository
GOLD: Go0018297 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Alligator mississippiensis (Daudin, 1801) taxonomy/phylogenetic Integrated Taxonomic Information System
search the REPTILE database taxonomy/phylogenetic TIGR Reptile Database
Alligator mississippiensis taxonomy/phylogenetic TreeBase
WebScipio: Alligator mississippiensis organism-specific WebScipio - eukaryotic gene identification
diArk: Alligator mississippiensis organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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