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LOC106579130 myosin light chain kinase, smooth muscle-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106579130, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106579130
Gene description
myosin light chain kinase, smooth muscle-like
See related
Ensembl:ENSSSAG00000063005
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: ssa19
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa19 NC_059460.1 (61221501..61241399, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa19 NC_027318.1 (57385563..57406863, complement)

Chromosome ssa19 - NC_059460.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 239 Neighboring gene CoA synthase Neighboring gene uncharacterized LOC106579367 Neighboring gene uncharacterized LOC106579365

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin light chain kinase, smooth muscle-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059460.1 Reference Ssal_v3.1

    Range
    61221501..61241399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014158718.2 → XP_014014193.1  myosin light chain kinase, smooth muscle-like isoform X2

    UniProtKB/TrEMBL
    A0A1S3NFG3
    Related
    ENSSSAP00000125665.1, ENSSSAT00000195526.1
    Conserved Domains (7) summary
    smart00408
    Location:627 → 691
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:155 → 240
    FN3; Fibronectin type 3 domain
    smart00220
    Location:279 → 534
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart00410
    Location:64 → 149
    IG_like; Immunoglobulin like
    pfam07679
    Location:613 → 701
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:65 → 157
    Ig; Immunoglobulin domain
    cl21453
    Location:285 → 534
    PKc_like; Protein Kinases, catalytic domain

  2. XM_014158717.2 → XP_014014192.1  myosin light chain kinase, smooth muscle-like isoform X1

    UniProtKB/TrEMBL
    A0A1S3NFK6
    Related
    ENSSSAP00000131244.1, ENSSSAT00000202718.1
    Conserved Domains (7) summary
    smart00408
    Location:639 → 703
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:167 → 252
    FN3; Fibronectin type 3 domain
    smart00220
    Location:291 → 546
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart00410
    Location:76 → 161
    IG_like; Immunoglobulin like
    pfam07679
    Location:625 → 713
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:77 → 169
    Ig; Immunoglobulin domain
    cl21453
    Location:297 → 546
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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