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LOC104943457 myosin light chain kinase, smooth muscle-like [ Notothenia coriiceps (black rockcod) ]

Gene ID: 104943457, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104943457
Gene description
myosin light chain kinase, smooth muscle-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Notothenia coriiceps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011338805.1 (272786..284154)

NW_011338805.1Genomic Context describing neighboring genes Neighboring gene dephospho-CoA kinase domain containing Neighboring gene pseudouridylate synthase 3 Neighboring gene CoA synthase Neighboring gene zinc finger DHHC-type palmitoyltransferase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011338805.1 Unplaced Scaffold Reference NC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin light chain kinase, smooth muscle-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NC01 Primary Assembly

Genomic

  1. NW_011338805.1 Reference NC01 Primary Assembly

    Range
    272786..284154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010768860.1 → XP_010767162.1  myosin light chain kinase, smooth muscle-like isoform X1

    See identical proteins and their annotated locations for XP_010767162.1

    UniProtKB/TrEMBL
    A0A6I9MYW4
    Conserved Domains (7) summary
    cd00096
    Location:85 → 151
    Ig; Immunoglobulin domain
    smart00220
    Location:425 → 680
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart00410
    Location:209 → 294
    IG_like; Immunoglobulin like
    cd00063
    Location:298 → 394
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:68 → 154
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:209 → 302
    Ig; Immunoglobulin domain
    cl21453
    Location:431 → 679
    PKc_like; Protein Kinases, catalytic domain

  2. XM_010768859.1 → XP_010767161.1  myosin light chain kinase, smooth muscle-like isoform X1

    See identical proteins and their annotated locations for XP_010767161.1

    UniProtKB/TrEMBL
    A0A6I9MYW4
    Conserved Domains (7) summary
    cd00096
    Location:85 → 151
    Ig; Immunoglobulin domain
    smart00220
    Location:425 → 680
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart00410
    Location:209 → 294
    IG_like; Immunoglobulin like
    cd00063
    Location:298 → 394
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:68 → 154
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:209 → 302
    Ig; Immunoglobulin domain
    cl21453
    Location:431 → 679
    PKc_like; Protein Kinases, catalytic domain

  3. XM_010768861.1 → XP_010767163.1  myosin light chain kinase, smooth muscle-like isoform X2

    UniProtKB/TrEMBL
    A0A6I9MV40
    Conserved Domains (5) summary
    smart00220
    Location:172 → 427
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00063
    Location:45 → 141
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:506 → 596
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:510 → 596
    Ig; Immunoglobulin domain
    cl21453
    Location:178 → 426
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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