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LOC103911751 zinc finger protein 436-like [ Danio rerio (zebrafish) ]

Gene ID: 103911751, updated on 4-Nov-2022

Summary

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Gene symbol
LOC103911751
Gene description
zinc finger protein 436-like
See related
Ensembl:ENSDARG00000088927
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (26935111..26938095)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (26973410..26976836)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene EH domain binding protein 1-like 1b Neighboring gene RAB1B, member RAS oncogene family b Neighboring gene FERM domain containing 8 Neighboring gene VPS51 subunit of GARP complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein 436-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    26935111..26938095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009305347.3 → XP_009303622.2  zinc finger protein 436-like

    UniProtKB/TrEMBL
    A0A8M3AWR3, F1QII2
    Related
    ENSDARP00000109023.2, ENSDART00000129993.3

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394787.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    162739..165767
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021472293.1 → XP_021327968.1  zinc finger protein 436-like

    UniProtKB/TrEMBL
    A0A8M9PLQ6
    Conserved Domains (4) summary
    PHA00733
    Location:199 → 247
    PHA00733; hypothetical protein
    COG5048
    Location:62 → 152
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:174 → 194
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:186 → 211
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
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