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Zc3hav1 zinc finger CCCH-type containing, antiviral 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103726087, updated on 11-Mar-2024

Summary

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Gene symbol
Zc3hav1
Gene description
zinc finger CCCH-type containing, antiviral 1
See related
Ensembl:ENSNGAG00000016695
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008359625.1 (4584314..4642526, complement)

NW_008359625.1Genomic Context describing neighboring genes Neighboring gene KIAA1549 ortholog Neighboring gene SNRPN upstream reading frame protein pseudogene Neighboring gene zinc finger CCCH-type containing, antiviral 1 like Neighboring gene intraflagellar transport 56 Neighboring gene ubinuclein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008359625 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH-type antiviral protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008359625.1 Reference S.galili_v1.0 Primary Assembly

    Range
    4584314..4642526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008823482.3 → XP_008821704.1  zinc finger CCCH-type antiviral protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6RA57
    Conserved Domains (4) summary
    cd01439
    Location:752 → 861
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:574 → 649
    WWE; WWE domain
    pfam18606
    Location:5 → 66
    HTH_53; Zap helix turn helix N-terminal domain
    pfam18633
    Location:143 → 170
    zf-CCCH_8; Zinc-finger antiviral protein (ZAP) zinc finger domain 3

  2. XM_008823483.3 → XP_008821705.2  zinc finger CCCH-type antiviral protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RA57
    Related
    ENSNGAP00000015780.1, ENSNGAT00000021387.1
    Conserved Domains (6) summary
    cd01439
    Location:880 → 989
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam02825
    Location:702 → 777
    WWE; WWE domain
    pfam18606
    Location:5 → 66
    HTH_53; Zap helix turn helix N-terminal domain
    pfam18633
    Location:143 → 170
    zf-CCCH_8; Zinc-finger antiviral protein (ZAP) zinc finger domain 3
    cl02565
    Location:236 → 318
    RGS; Regulator of G protein signaling (RGS) domain superfamily
    cl02729
    Location:639 → 693
    WWE; WWE domain
Nucleotide Protein
Heading Accession and Version

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