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LOC103262213 zinc finger protein 225-like [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103262213, updated on 9-Nov-2023

Summary

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Gene symbol
LOC103262213
Gene description
zinc finger protein 225-like
See related
Ensembl:ENSTSYG00000008934
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007248486.1 (137086..189149)

NW_007248486.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein-like Neighboring gene zona pellucida sperm-binding protein 2-like Neighboring gene zinc finger protein 224-like Neighboring gene zinc finger protein 234 Neighboring gene zinc finger protein 226

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007248486 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 225-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007248486.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    137086..189149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021713273.1 → XP_021568948.1  zinc finger protein 225-like isoform X2

    UniProtKB/TrEMBL
    A0A3Q0E4L6
    Conserved Domains (3) summary
    COG5048
    Location:202 → 672
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:206 → 226
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:8 → 48
    KRAB; KRAB box

  2. XM_008059841.2 → XP_008058032.1  zinc finger protein 225-like isoform X1

    UniProtKB/TrEMBL
    A0A1U7TYA0
    Related
    ENSTSYP00000008191.2, ENSTSYT00000008932.2
    Conserved Domains (5) summary
    smart00349
    Location:8 → 67
    KRAB; krueppel associated box
    COG5048
    Location:202 → 672
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:206 → 226
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:8 → 47
    KRAB; KRAB box
    pfam13465
    Location:218 → 243
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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