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USP24 ubiquitin specific peptidase 24 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563871, updated on 10-Mar-2024

Summary

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Gene symbol
USP24
Gene description
ubiquitin specific peptidase 24
Locus tag
Y1Q_0003552
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
67
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (11213401..11306242, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714045.1 (7280065..7371550, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene barttin CLCNK type accessory subunit beta Neighboring gene proprotein convertase subtilisin/kexin type 9 Neighboring gene uncharacterized LOC132250737 Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    11213401..11306242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014598679.3 → XP_014454165.1  ubiquitin carboxyl-terminal hydrolase 24

    UniProtKB/TrEMBL
    A0A151M4I7
    Conserved Domains (4) summary
    cd01769
    Location:954 → 1018
    UBL; Ubiquitin-like domain of UBL
    cd02659
    Location:1672 → 2029
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd14286
    Location:6 → 42
    UBA_UBP24; UBA domain found in ubiquitin carboxyl-terminal hydrolase 24 (UBP24) and similar proteins
    pfam00443
    Location:1674 → 2024
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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