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TEAD4 TEA domain transcription factor 4 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102386544, updated on 10-Mar-2024

Summary

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Gene symbol
TEAD4
Gene description
TEA domain transcription factor 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842806.1 (27304..103416, complement)

NW_005842806.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102386295 Neighboring gene uncharacterized LOC112547915 Neighboring gene TUB like protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842806 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional enhancer factor TEF-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842806.1 Reference ASM45574v1 Primary Assembly

    Range
    27304..103416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025191286.1 → XP_025047071.1  transcriptional enhancer factor TEF-3 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0FN36

  2. XM_025191283.1 → XP_025047068.1  transcriptional enhancer factor TEF-3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0FN31
    Conserved Domains (1) summary
    cl02603
    Location:1 → 32
    TEA; TEA/ATTS domain family

  3. XM_025191284.1 → XP_025047069.1  transcriptional enhancer factor TEF-3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0FN31
    Conserved Domains (1) summary
    cl02603
    Location:1 → 32
    TEA; TEA/ATTS domain family

  4. XM_025191288.1 → XP_025047073.1  transcriptional enhancer factor TEF-3 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0FN36

  5. XM_025191285.1 → XP_025047070.1  transcriptional enhancer factor TEF-3 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0FLL9
    Conserved Domains (1) summary
    cl02603
    Location:15 → 61
    TEA; TEA/ATTS domain family

  6. XM_025191282.1 → XP_025047067.1  transcriptional enhancer factor TEF-3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0FIJ5
    Conserved Domains (1) summary
    cl02603
    Location:15 → 61
    TEA; TEA/ATTS domain family

  7. XM_006035111.2 → XP_006035173.1  transcriptional enhancer factor TEF-3 isoform X3

    UniProtKB/TrEMBL
    A0A1U7SNT0
    Conserved Domains (1) summary
    cl02603
    Location:15 → 61
    TEA; TEA/ATTS domain family
Nucleotide Protein
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