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Zfpm1 zinc finger protein, FOG family member 1 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102025512, updated on 10-Mar-2024

Summary

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Gene symbol
Zfpm1
Gene description
zinc finger protein, FOG family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955541.1 (2461690..2495614)

NW_004955541.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102030476 Neighboring gene BTG3 associated nuclear protein Neighboring gene zinc finger protein 469 Neighboring gene thyrotropin-releasing hormone receptor-like Neighboring gene zinc finger CCCH-type containing 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955541.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZFPM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955541.1 Reference ChiLan1.0 Primary Assembly

    Range
    2461690..2495614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013508007.1 → XP_013363461.1  zinc finger protein ZFPM1

    Conserved Domains (3) summary
    sd00017
    Location:316 → 335
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12301
    Location:625 → 692
    CD99L2; CD99 antigen like protein 2
    pfam13465
    Location:327 → 352
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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