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Tcfl5 transcription factor like 5 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101843764, updated on 8-Mar-2024

Summary

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Gene symbol
Tcfl5
Gene description
transcription factor like 5
See related
EnsemblRapid:ENSMAUG00000015318
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429209.1 (24058056..24084295, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801651.1 (11739178..11764924, complement)

NW_024429209.1Genomic Context describing neighboring genes Neighboring gene opioid growth factor receptor Neighboring gene collagen type IX alpha 3 chain Neighboring gene uncharacterized LOC121134430 Neighboring gene death inducer-obliterator 1 Neighboring gene GID complex subunit 8 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor-like 5 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429209.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    24058056..24084295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040732624.1 → XP_040588558.1  transcription factor-like 5 protein isoform X2

    Conserved Domains (1) summary
    cd18909
    Location:389 → 448
    bHLH_TCFL5; basic helix-loop-helix (bHLH) domain found in transcription factor-like 5 protein (TCFL5) and similar proteins

  2. XM_005074524.4 → XP_005074581.3  transcription factor-like 5 protein isoform X1

    Related
    ENSMAUP00000016039.2, ENSMAUT00000019972.2
    Conserved Domains (1) summary
    cd18909
    Location:390 → 449
    bHLH_TCFL5; basic helix-loop-helix (bHLH) domain found in transcription factor-like 5 protein (TCFL5) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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