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ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101356460, updated on 8-Mar-2024

Summary

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Gene symbol
ISLR2
Gene description
immunoglobulin superfamily containing leucine rich repeat 2
See related
EnsemblRapid:ENSTMLG00000015992
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See ISLR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443966.1 (19539614..19541851)

NW_004443966.1Genomic Context describing neighboring genes Neighboring gene stomatin like 1 Neighboring gene PML nuclear body scaffold Neighboring gene adenosine 3'-phospho 5'-phosphosulfate transporter 2 pseudogene Neighboring gene immunoglobulin superfamily containing leucine rich repeat Neighboring gene signaling receptor and transporter of retinol STRA6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443966 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily containing leucine-rich repeat protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443966.1 Reference TriManLat1.0 Primary Assembly

    Range
    19539614..19541851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004374738.1 → XP_004374795.1  immunoglobulin superfamily containing leucine-rich repeat protein 2

    Related
    ENSTMLP00000022371.1, ENSTMLT00000023985.1
    Conserved Domains (6) summary
    cd00096
    Location:256 → 369
    Ig; Immunoglobulin domain
    smart00082
    Location:181 → 229
    LRRCT; Leucine rich repeat C-terminal domain
    smart00410
    Location:256 → 372
    IG_like; Immunoglobulin like
    sd00033
    Location:36 → 52
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:75 → 121
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:52 → 111
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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