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ZBTB16 zinc finger and BTB domain containing 16 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101350829, updated on 8-Mar-2024

Summary

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Gene symbol
ZBTB16
Gene description
zinc finger and BTB domain containing 16
See related
EnsemblRapid:ENSTMLG00000014775
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See ZBTB16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444030.1 (10346255..10555363)

NW_004444030.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 3B Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene nicotinamide N-methyltransferase Neighboring gene chromosome unknown C11orf71 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444030 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444030.1 Reference TriManLat1.0 Primary Assembly

    Range
    10346255..10555363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004382519.2 → XP_004382576.1  zinc finger and BTB domain-containing protein 16

    UniProtKB/TrEMBL
    A0A2Y9DWQ0
    Related
    ENSTMLP00000020685.1, ENSTMLT00000022165.1
    Conserved Domains (6) summary
    smart00225
    Location:35 → 106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520 → 540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518 → 540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25 → 106
    BTB; BTB/POZ domain
    pfam13465
    Location:561 → 584
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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