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ZNF557 zinc finger protein 557 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101343701, updated on 8-Mar-2024

Summary

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Gene symbol
ZNF557
Gene description
zinc finger protein 557
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Also known as
ZNF558
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443993.1 (4963455..4992138)

NW_004443993.1Genomic Context describing neighboring genes Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene insulin receptor Neighboring gene insulin receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443993 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 557
Names
zinc finger protein 558

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443993.1 Reference TriManLat1.0 Primary Assembly

    Range
    4963455..4992138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023733230.1 → XP_023588998.1  zinc finger protein 557

    UniProtKB/TrEMBL
    A0A2Y9RBT3
    Conserved Domains (4) summary
    COG5048
    Location:146 → 207
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:122 → 142
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:42 → 83
    KRAB; KRAB box
    pfam13465
    Location:134 → 159
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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