U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DHX38 DEAH-box helicase 38 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100993786, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DHX38
Gene description
DEAH-box helicase 38
See related
Ensembl:ENSPPAG00000042488
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 18
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 18 NC_073267.2 (82020743..82037373, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 16 NC_073265.1 (87948348..87965097, complement)

Chromosome 18 - NC_073267.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene c-Myc-binding protein-like Neighboring gene polyamine modulated factor 1 binding protein 1 Neighboring gene large ribosomal subunit protein P1-like Neighboring gene haptoglobin Neighboring gene thioredoxin like 4B Neighboring gene haptoglobin-related protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073267.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    82020743..82037373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008954865.5 → XP_008953113.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    See identical proteins and their annotated locations for XP_008953113.1

    UniProtKB/TrEMBL
    A0A2R9CCV9, A0A2R9CCX7
    Conserved Domains (5) summary
    smart00490
    Location:758 → 861
    HELICc; helicase superfamily c-terminal domain
    smart00487
    Location:526 → 713
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:930 → 1012
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:551 → 687
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam07717
    Location:1063 → 1146
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.