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Inpp5b inositol polyphosphate-5-phosphatase B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751850, updated on 8-Mar-2024

Summary

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Gene symbol
Inpp5b
Gene description
inositol polyphosphate-5-phosphatase B
Locus tag
I79_008774
See related
Ensembl:ENSCGRG00015006115
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Inpp5b in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613886.1 (647837..720329)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (28257690..28326183, complement)

NW_003613886.1Genomic Context describing neighboring genes Neighboring gene four and a half LIM domains 3 Neighboring gene splicing factor 3a subunit 3 Neighboring gene metal regulatory transcription factor 1 Neighboring gene mannosidase endo-alpha like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-1,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase
Names
Type II inositol-1,4,5-trisphosphate 5-phosphatase
inositol polyphosphate-5-phosphatase, 75kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613886.1 Reference CriGri_1.0 Primary Assembly

    Range
    647837..720329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016975497.3 → XP_016830986.2  LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase

    UniProtKB/TrEMBL
    A0A8C2M0Z1, A0A9J7FCJ0

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    28257690..28326183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399223.2 → XP_027255024.1  LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase

    UniProtKB/TrEMBL
    A0A8C2M0Z1, A0A9J7FCJ0
    Related
    ENSCGRP00015007898.1, ENSCGRT00015009754.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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