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CHAD chondroadherin [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100617168, updated on 8-May-2024

Summary

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Gene symbol
CHAD
Gene description
chondroadherin
See related
EnsemblRapid:ENSMODG00000020903
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See CHAD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (192344000..192349611)
103 previous assembly MonDom5 (GCF_000002295.2) Unplaced Scaffold NW_001583314.1 (263394..268298, complement)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene MYCBP associated protein Neighboring gene radical S-adenosyl methionine domain containing 1 Neighboring gene acyl-CoA synthetase family member 2 Neighboring gene leucine rich repeat containing 59 Neighboring gene essential meiotic structure-specific endonuclease 1 Neighboring gene mitochondrial ribosomal protein L27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroadherin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    192344000..192349611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056816659.1 → XP_056672637.1  chondroadherin

    UniProtKB/TrEMBL
    H9H7R6
    Related
    ENSMODP00000026135.2, ENSMODT00000026600.5

  2. XM_003342148.4 → XP_003342196.1  chondroadherin

    UniProtKB/TrEMBL
    H9H7R6
    Conserved Domains (5) summary
    smart00082
    Location:302 → 349
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:92 → 233
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:55 → 78
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01462
    Location:23 → 51
    LRRNT; Leucine rich repeat N-terminal domain
    pfam13855
    Location:77 → 137
    LRR_8; Leucine rich repeat
Nucleotide Protein
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