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PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100394141, updated on 8-Mar-2024

Summary

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Gene symbol
PRKAG3
Gene description
protein kinase AMP-activated non-catalytic subunit gamma 3
See related
Ensembl:ENSCJAG00000011362
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (137029823..137045059, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (138261533..138271575, complement)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase like 4 Neighboring gene cytochrome P450 family 27 subfamily A member 1 Neighboring gene tubulin beta-2 chain-like Neighboring gene Wnt family member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
5'-AMP-activated protein kinase subunit gamma-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    137029823..137045059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035305748.2 → XP_035161639.1  5'-AMP-activated protein kinase subunit gamma-3 isoform X2

    Conserved Domains (3) summary
    cd02205
    Location:438 → 503
    CBS_pair_SF; CBS repeat [structural motif]
    cd04618
    Location:274 → 411
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cl15354
    Location:437 → 533
    CBS_pair_SF; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily

  2. XM_035305749.2 → XP_035161640.1  5'-AMP-activated protein kinase subunit gamma-3 isoform X3

    Conserved Domains (2) summary
    cd04618
    Location:228 → 365
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:391 → 514
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

  3. XM_035305751.2 → XP_035161642.1  5'-AMP-activated protein kinase subunit gamma-3 isoform X4

    Conserved Domains (2) summary
    cd04618
    Location:198 → 335
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:361 → 484
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

  4. XM_035305752.2 → XP_035161643.1  5'-AMP-activated protein kinase subunit gamma-3 isoform X6

    Conserved Domains (2) summary
    cd04618
    Location:167 → 304
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:330 → 453
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

  5. XM_008999502.4 → XP_008997750.2  5'-AMP-activated protein kinase subunit gamma-3 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W5N5
    Conserved Domains (2) summary
    cd04618
    Location:274 → 411
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:437 → 560
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

  6. XM_002749797.5 → XP_002749843.2  5'-AMP-activated protein kinase subunit gamma-3 isoform X5

    UniProtKB/TrEMBL
    F7HB36
    Conserved Domains (2) summary
    cd04618
    Location:192 → 329
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:355 → 478
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

  7. XM_035305746.2 → XP_035161637.1  5'-AMP-activated protein kinase subunit gamma-3 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W5N5
    Conserved Domains (2) summary
    cd04618
    Location:274 → 411
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:437 → 560
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase
Nucleotide Protein
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