1ZFJ,1O50,1PBJ,1PVM,1VR9,1Y5H,1YAV,2D4Z,2EF7,2O16,2OOX,2OOX,2P9M,2RC3,2RIF,2V8Q,2V8Q,2YVX,2YZI,2YZQ,2YZQ,3DDJ,3DDJ,3FNA,3FV6,3GBY,3KH5,3KH5,3KPC,3KXR,3L2B,3LV9,3PC2,4GQV,4NOC,5G5R,5IIP


Conserved Protein Domain Family
CBS_pair_SF

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cd02205: CBS_pair_SF 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341358
Aligned: 151 rows
Threshold Bit Score: 47.2392
Created: 12-Dec-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #########      #########        ######     ######  ######                  #####
1ZFJ_A     97 IIDPFFLTPe---hKVSEAEELXQryr---isGVPIVEtlanrKLVGIItnRDXRFIsdy------------napISEHX 158 Streptococcus pyog...
1YAV_B     23 ADKVAHVQVg---nNLEHALLVLTktg---ytAIPVLDps--yRLHGLIgtNMIMNSifglerie--fekldqitVEEVM 92  Bacillus subtilis
3KXR_A     61 DHQXLVLSDk---aTVAQAQRFFRrieldcndNLFIVDea--dKYLGTVrrYDIFKHeph-------------epLISLL 122 Shewanella oneiden...
3PC2_A    392 PAPPVILKSd---aTVGEAIALMKkhr---vdQLPVVDqd-dgSVLGVVgqETLITQivsmnr-------qqsdpAIKAL 457 fruit fly
NP_233204 142 DRKVYTLPFs---iSVRRAKVLLDkyhydspqYIYLINka--kKFRGLVsfSDVLQAeet-------------tqLKNLR 203 Vibrio cholerae O1...
NP_350255  10 KNEVIYEKIt---sTMRQALERMEyhr---ytAIPILDdn--gKYIGTLteGDLLWKlkntpeidfqttnkvsikDIPRH 81  Clostridium acetob...
NP_464081  10 KINLTTVPGd---aTLQEAIHLLEesg---yrCVPVLDek-geKFLGNIykMHIYKHaangg--------slsdpVMSLI 74  Listeria monocytog...
NP_844462  10 KREVLFCSSs---iTIAEALEHLNktg---yrCVPVLDek-keKYLGNIykVDILEYkgsl-----------eesVLQLL 71  Bacillus anthracis...
AAS78507  281 RRRPVSLIRktpgfGPRSALKLLQded---rdYGYVLErg--qKFIGVVsiDSLKKAlae------------nqsLDSAL 343 Yersinia enterocol...
YP_207005  81 DRKIATLPFn---vSVGRAKKLLKtnlfeshqYMHLINra--hKFHGIVqyTDILTAdds-------------vkINTLK 142 Vibrio fischeri ES114
Feature 1                                                          
1ZFJ_A    159 tsehlVTAAvgTDLETAERILHehRIEKLPLVDns----gRLSGLITiKDIEK 207 Streptococcus pyogenes
1YAV_B     93 lt-diPRLHinDPIMKGFGMVI--NNGFVCVENde----qVFEGIFTrRVVLK 138 Bacillus subtilis
3KXR_A    123 se-dsRALTanTTLLDAAEAIEhsREIELPVIDda----gELIGRVTlRAATA 170 Shewanella oneidensis MR-1
3PC2_A    458 nk-rvIRLNesEILGKLARVLE--VDPSVLILGknpagkvELKALATkLDVTT 507 fruit fly
NP_233204 204 me-elVTLNakQTLSDAVDALEhtTLPIVPVLSdd----eTLIGEIDwHFALS 251 Vibrio cholerae O1 biovar eltor str. N16961
NP_350255  82 mn-nrPVHId-SDIEDLISKSV--SQNFVPVVDdn----nVFIGIIKrSDIMN 126 Clostridium acetobutylicum ATCC 824
NP_464081  75 kn-atKHICvnASFFEVFFTIK--ELPYIAVLNeq----gNFYGILThGKLLG 120 Listeria monocytogenes EGD-e
NP_844462  72 nd-keGYVRedSSFFKVFFTIK--KLPYLSVVDek----gAFLGILThKKVFE 117 Bacillus anthracis str. Ames
AAS78507  344 la-dpAPVPadMPLSELISLVAq-APCAVPVVGed----nSYIGIISkAMLLQ 390 Yersinia enterocolitica
YP_207005 143 le-dcLVLNvhQPLSESIEAIEhsAVPSVAIVDde----nTLIGQLDwQFAIN 190 Vibrio fischeri ES114

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