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CLUH clustered mitochondria homolog [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391689, updated on 8-Mar-2024

Summary

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Gene symbol
CLUH
Gene description
clustered mitochondria homolog
See related
Ensembl:ENSCJAG00000012281
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (61618442..61640327)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (64295091..64317056)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene RAP1 GTPase activating protein 2 Neighboring gene 60S ribosomal protein L3-like Neighboring gene coiled-coil domain containing 92B Neighboring gene platelet activating factor acetylhydrolase 1b regulatory subunit 1 Neighboring gene eukaryotic initiation factor 4A-I-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular distribution of mitochondria IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
clustered mitochondria protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    61618442..61640327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035299362.2 → XP_035155253.1  clustered mitochondria protein homolog isoform X3

    UniProtKB/TrEMBL
    U3F1Q3
    Conserved Domains (4) summary
    pfam13424
    Location:1140 → 1215
    TPR_12; Tetratricopeptide repeat
    pfam12807
    Location:805 → 986
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:393 → 613
    CLU; Clustered mitochondria
    pfam15044
    Location:103 → 176
    CLU_N; Mitochondrial function, CLU-N-term

  2. XM_035299363.2 → XP_035155254.1  clustered mitochondria protein homolog isoform X4

    UniProtKB/TrEMBL
    U3F1Q3
    Conserved Domains (4) summary
    pfam13424
    Location:1139 → 1214
    TPR_12; Tetratricopeptide repeat
    pfam12807
    Location:804 → 985
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:393 → 613
    CLU; Clustered mitochondria
    pfam15044
    Location:103 → 176
    CLU_N; Mitochondrial function, CLU-N-term

  3. XM_035299364.2 → XP_035155255.1  clustered mitochondria protein homolog isoform X5

    UniProtKB/TrEMBL
    U3EE46, U3F1Q3
    Conserved Domains (4) summary
    pfam13424
    Location:1102 → 1177
    TPR_12; Tetratricopeptide repeat
    pfam12807
    Location:767 → 948
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:355 → 575
    CLU; Clustered mitochondria
    pfam15044
    Location:65 → 138
    CLU_N; Mitochondrial function, CLU-N-term

  4. XM_035299360.2 → XP_035155251.1  clustered mitochondria protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8I3W7M3, U3F1Q3
    Conserved Domains (5) summary
    PHA03307
    Location:12 → 216
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam13424
    Location:1296 → 1371
    TPR_12; Tetratricopeptide repeat
    pfam12807
    Location:961 → 1142
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:549 → 769
    CLU; Clustered mitochondria
    pfam15044
    Location:259 → 332
    CLU_N; Mitochondrial function, CLU-N-term

  5. XM_035299361.2 → XP_035155252.1  clustered mitochondria protein homolog isoform X2

    UniProtKB/TrEMBL
    U3F1Q3
    Conserved Domains (5) summary
    PHA03307
    Location:12 → 216
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam13424
    Location:1295 → 1370
    TPR_12; Tetratricopeptide repeat
    pfam12807
    Location:960 → 1141
    eIF3_p135; Translation initiation factor eIF3 subunit 135
    pfam13236
    Location:549 → 769
    CLU; Clustered mitochondria
    pfam15044
    Location:259 → 332
    CLU_N; Mitochondrial function, CLU-N-term
Nucleotide Protein
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