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| Status |
Public on Apr 08, 2010 |
| Title |
Genome-wide Patterns of Population Structure and Admixture among Hispanic/Latino Populations |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
SNP genotyping by SNP array
|
| Summary |
Hispanic/Latino populations possess a complex genetic structure that reflects recent admixture among and potentially ancient substructure within Native American, European, and West African source populations. Here, we quantify genome-wide patterns of SNP and haplotype variation among 100 individuals with ancestry from Ecuador, Colombia, Puerto Rico, and the Dominican Republic genotyped using Illumina technology.
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| Overall design |
To investigate variations of continental ancestry between different Hispanic/Latino groups (using self-reported country-specific identification of individual, both parents, and all four grandparents) and within them from healthy controls represented in the New York Health Project Biorepository. Genotyped on the Illumina 610-Quad, which is identical to HumanHap550-v3 SNPs plus an additional ~60,000 SNPs for CNV, no CNV data is provided or was analyzed.
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| |
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| Contributor(s) |
Velez C, Ostrer H |
| Citation(s) |
20445096 |
| |
| Submission date |
Apr 07, 2010 |
| Last update date |
May 24, 2013 |
| Contact name |
Harry Ostrer |
| E-mail(s) |
harry.ostrer@nyumc.org
|
| Phone |
212-263-5746
|
| Fax |
212-263-3477
|
| Organization name |
NYU Langone Medical Center
|
| Department |
Department of Pediatrics
|
| Lab |
Human Genetics Program
|
| Street address |
550 First Avenue, MSB 136
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL8887 |
Illumina Human610-Quad v1.0 BeadChip |
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| Samples (100)
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| Relations |
| BioProject |
PRJNA126523 |
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