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    DCP1B decapping mRNA 1B [ Canis lupus dingo (dingo) ]

    Gene ID: 112668976, updated on 15-Mar-2024

    Summary

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    Gene symbol
    DCP1B
    Gene description
    decapping mRNA 1B
    See related
    Ensembl:ENSCAFG00020012014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus dingo (sub-species: dingo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current ASM325472v2 (GCF_003254725.2) 27 NC_064269.1 (44222078..44276124, complement)
    101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 27 Unlocalized Scaffold NW_023365217.1 (44600330..44654400, complement)

    Chromosome 27 - NC_064269.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 4 Neighboring gene 60S ribosomal protein L21-like Neighboring gene leucine rich repeats and transmembrane domains 2 Neighboring gene small ubiquitin-related modifier 1-like Neighboring gene calcium voltage-gated channel subunit alpha1 C Neighboring gene ribonuclease P protein subunit p25-like protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mRNA-decapping enzyme 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM325472v2

    Genomic

    1. NC_064269.1 Reference ASM325472v2

      Range
      44222078..44276124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025461665.3 → XP_025317450.1  mRNA-decapping enzyme 1B isoform X1

      UniProtKB/TrEMBL
      A0A8C0NWR1, A0A8C0QZF7, A0A8C0TUU0, A0A8I3QAS7
      Related
      ENSCAFP00020014891.1
      Conserved Domains (2) summary
      cd09804
      Location:16 → 131
      Dcp1; mRNA decapping enzyme 1 (Dcp1)
      pfam16741
      Location:569 → 611
      mRNA_decap_C; mRNA-decapping enzyme C-terminus

    2. XM_025461666.3 → XP_025317451.1  mRNA-decapping enzyme 1B isoform X2

      UniProtKB/TrEMBL
      A0A8C0P9B8
      Conserved Domains (1) summary
      cd09804
      Location:16 → 131
      Dcp1; mRNA decapping enzyme 1 (Dcp1)

    3. XM_025461668.3 → XP_025317453.1  mRNA-decapping enzyme 1B isoform X3

      UniProtKB/TrEMBL
      A0A8P0TBL4
      Conserved Domains (2) summary
      pfam16741
      Location:495 → 537
      mRNA_decap_C; mRNA-decapping enzyme C-terminus
      cl17171
      Location:1 → 57
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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