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    LOC6611642 vascular endothelial growth factor receptor 1 [ Drosophila sechellia ]

    Gene ID: 6611642, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC6611642
    Gene description
    vascular endothelial growth factor receptor 1
    Locus tag
    Dsec_GM13122
    See related
    EnsemblRapid:LOC6611642
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM13122; GM13122-PA
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    Genomic context

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    Location:
    chromosome: 2L
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2L NC_045949.1 (8064920..8083405, complement)

    Chromosome 2L - NC_045949.1Genomic Context describing neighboring genes Neighboring gene cytidine deaminase Neighboring gene uncharacterized LOC6611640 Neighboring gene sorting nexin-32 Neighboring gene serine protease inhibitor 42Dd Neighboring gene uncharacterized LOC6611645

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045949.1 Chromosome 2L Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vascular endothelial growth factor receptor 1
    Names
    Dsec\GM13122
    Dsec\GM13122-PA
    dsec_GLEANR_1357

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045949.1 Reference ASM438219v1

      Range
      8064920..8083405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032724215.1 → XP_032580106.1  vascular endothelial growth factor receptor 1 isoform X5

      Related
      XP_032580106.1, XM_032724215.1
      Conserved Domains (5) summary
      smart00409
      Location:352 → 438
      IG; Immunoglobulin
      pfam13927
      Location:678 → 742
      Ig_3; Immunoglobulin domain
      cd00096
      Location:787 → 791
      Ig; Ig strand B [structural motif]
      cl11960
      Location:785 → 857
      Ig; Immunoglobulin domain
      cl21453
      Location:933 → 1303
      PKc_like; Protein Kinases, catalytic domain

    2. XM_032724187.1 → XP_032580078.1  vascular endothelial growth factor receptor 1 isoform X1

      Related
      XP_032580078.1, XM_032724187.1
      Conserved Domains (5) summary
      smart00409
      Location:352 → 438
      IG; Immunoglobulin
      pfam13927
      Location:678 → 742
      Ig_3; Immunoglobulin domain
      cd00096
      Location:787 → 791
      Ig; Ig strand B [structural motif]
      cl11960
      Location:785 → 857
      Ig; Immunoglobulin domain
      cl21453
      Location:933 → 1338
      PKc_like; Protein Kinases, catalytic domain

    3. XM_032724227.1 → XP_032580118.1  vascular endothelial growth factor receptor 1 isoform X7

      Related
      XP_032580118.1, XM_032724227.1
      Conserved Domains (5) summary
      smart00409
      Location:346 → 432
      IG; Immunoglobulin
      pfam13927
      Location:672 → 736
      Ig_3; Immunoglobulin domain
      cd00096
      Location:781 → 785
      Ig; Ig strand B [structural motif]
      cl11960
      Location:779 → 851
      Ig; Immunoglobulin domain
      cl21453
      Location:927 → 1332
      PKc_like; Protein Kinases, catalytic domain

    4. XM_032724203.1 → XP_032580094.1  vascular endothelial growth factor receptor 1 isoform X3

      Related
      XP_032580094.1, XM_032724203.1
      Conserved Domains (5) summary
      smart00409
      Location:352 → 438
      IG; Immunoglobulin
      pfam13927
      Location:669 → 733
      Ig_3; Immunoglobulin domain
      cd00096
      Location:778 → 782
      Ig; Ig strand B [structural motif]
      cl11960
      Location:776 → 848
      Ig; Immunoglobulin domain
      cl21453
      Location:924 → 1329
      PKc_like; Protein Kinases, catalytic domain

    5. XM_032724220.1 → XP_032580111.1  vascular endothelial growth factor receptor 1 isoform X6

      Related
      XP_032580111.1, XM_032724220.1
      Conserved Domains (5) summary
      smart00409
      Location:352 → 438
      IG; Immunoglobulin
      pfam13927
      Location:678 → 742
      Ig_3; Immunoglobulin domain
      cd00096
      Location:787 → 791
      Ig; Ig strand B [structural motif]
      cl11960
      Location:785 → 857
      Ig; Immunoglobulin domain
      cl21453
      Location:933 → 1338
      PKc_like; Protein Kinases, catalytic domain

    6. XM_002036142.2 → XP_002036178.1  vascular endothelial growth factor receptor 1 isoform X8

      See identical proteins and their annotated locations for XP_002036178.1

      UniProtKB/TrEMBL
      B4HYH1
      Related
      XP_002036178.1, XM_002036142.2
      Conserved Domains (7) summary
      cd00096
      Location:606 → 671
      Ig; Immunoglobulin domain
      smart00408
      Location:711 → 772
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:278 → 364
      IG; Immunoglobulin
      smart00410
      Location:604 → 686
      IG_like; Immunoglobulin like
      pfam07714
      Location:867 → 1261
      Pkinase_Tyr; Protein tyrosine kinase
      cl11960
      Location:278 → 360
      Ig; Immunoglobulin domain
      cl21453
      Location:859 → 1264
      PKc_like; Protein Kinases, catalytic domain

    7. XM_032724255.1 → XP_032580146.1  vascular endothelial growth factor receptor 1 isoform X13

      Related
      XP_032580146.1, XM_032724255.1
      Conserved Domains (5) summary
      smart00409
      Location:272 → 358
      IG; Immunoglobulin
      pfam13927
      Location:598 → 662
      Ig_3; Immunoglobulin domain
      cd00096
      Location:707 → 711
      Ig; Ig strand B [structural motif]
      cl11960
      Location:705 → 777
      Ig; Immunoglobulin domain
      cl21453
      Location:853 → 1223
      PKc_like; Protein Kinases, catalytic domain

    8. XM_032724248.1 → XP_032580139.1  vascular endothelial growth factor receptor 1 isoform X10

      Related
      XP_032580139.1, XM_032724248.1
      Conserved Domains (5) summary
      smart00409
      Location:272 → 358
      IG; Immunoglobulin
      pfam13927
      Location:598 → 662
      Ig_3; Immunoglobulin domain
      cd00096
      Location:707 → 711
      Ig; Ig strand B [structural motif]
      cl11960
      Location:705 → 777
      Ig; Immunoglobulin domain
      cl21453
      Location:853 → 1258
      PKc_like; Protein Kinases, catalytic domain

    9. XM_032724210.1 → XP_032580101.1  vascular endothelial growth factor receptor 1 isoform X4

      Related
      XP_032580101.1, XM_032724210.1
      Conserved Domains (5) summary
      smart00409
      Location:346 → 432
      IG; Immunoglobulin
      pfam13927
      Location:663 → 727
      Ig_3; Immunoglobulin domain
      cd00096
      Location:772 → 776
      Ig; Ig strand B [structural motif]
      cl11960
      Location:770 → 842
      Ig; Immunoglobulin domain
      cl21453
      Location:918 → 1323
      PKc_like; Protein Kinases, catalytic domain

    10. XM_032724192.1 → XP_032580083.1  vascular endothelial growth factor receptor 1 isoform X2

      Related
      XP_032580083.1, XM_032724192.1
      Conserved Domains (5) summary
      smart00409
      Location:346 → 432
      IG; Immunoglobulin
      pfam13927
      Location:672 → 736
      Ig_3; Immunoglobulin domain
      cd00096
      Location:781 → 785
      Ig; Ig strand B [structural motif]
      cl11960
      Location:779 → 851
      Ig; Immunoglobulin domain
      cl21453
      Location:927 → 1332
      PKc_like; Protein Kinases, catalytic domain

    11. XM_032724249.1 → XP_032580140.1  vascular endothelial growth factor receptor 1 isoform X11

      Related
      XP_032580140.1, XM_032724249.1
      Conserved Domains (4) summary
      smart00410
      Location:278 → 364
      IG_like; Immunoglobulin like
      cd00096
      Location:597 → 659
      Ig; Immunoglobulin domain
      cl11960
      Location:702 → 774
      Ig; Immunoglobulin domain
      cl21453
      Location:850 → 1255
      PKc_like; Protein Kinases, catalytic domain

    12. XM_032724254.1 → XP_032580145.1  vascular endothelial growth factor receptor 1 isoform X12

      Related
      XP_032580145.1, XM_032724254.1
      Conserved Domains (5) summary
      smart00409
      Location:278 → 364
      IG; Immunoglobulin
      pfam13927
      Location:604 → 668
      Ig_3; Immunoglobulin domain
      cd00096
      Location:713 → 717
      Ig; Ig strand B [structural motif]
      cl11960
      Location:711 → 783
      Ig; Immunoglobulin domain
      cl21453
      Location:859 → 1229
      PKc_like; Protein Kinases, catalytic domain

    13. XM_032724246.1 → XP_032580137.1  vascular endothelial growth factor receptor 1 isoform X9

      Related
      XP_032580137.1, XM_032724246.1
      Conserved Domains (5) summary
      smart00409
      Location:278 → 364
      IG; Immunoglobulin
      pfam13927
      Location:604 → 668
      Ig_3; Immunoglobulin domain
      cd00096
      Location:713 → 717
      Ig; Ig strand B [structural motif]
      cl11960
      Location:711 → 783
      Ig; Immunoglobulin domain
      cl21453
      Location:859 → 1264
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
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